DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and Arhgef25

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001387885.1 Gene:Arhgef25 / 314904 RGDID:735210 Length:613 Species:Rattus norvegicus


Alignment Length:420 Identity:105/420 - (25%)
Similarity:180/420 - (42%) Gaps:91/420 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   518 ASVESLAESENELGDQHHPPAMSVLEKTCL---EIVDSERSFVEDLGQVIKGYLQDWKERA---C 576
            |..|:|:::.....:|    ..:.||::..   |:|::||.:|:||||:::||:.....:.   .
  Rat   177 AEEETLSQAPKNEEEQ----KKTALERSMFVLSELVETERMYVDDLGQIVEGYMATMATQGVPES 237

  Fly   577 LRVDELQILFANIEEIYEFN-SMLLQRLINTGRDPGRIARCFIDLRDGFDVYTTYCTSYPEAISL 640
            ||..: :|:|.||::|||:: ...||.|....:||..:|:.||.......:|..||.:.|::..:
  Rat   238 LRGRD-RIVFGNIQQIYEWHRDYFLQELQQCLKDPDWLAQLFIKHERRLHMYVVYCQNKPKSEHV 301

  Fly   641 LTKLLQATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSLRKH-----CDVKEVVEA 700
            |::...     |.....::.|.|||.|...|:||||||:||.|||....|:     .|.:|:.:|
  Rat   302 LSEFGD-----SYFEELRQQLGHRLQLSDLLIKPVQRIMKYQLLLKDFLKYYRRAGMDTEELEQA 361

  Fly   701 HVIMRQVAHNIDQVKRKQEQQSRVKELSGILDGWLGPELTVLGEL----------RQEGLLMEQH 755
            ..:|..|.      ||..:..|     .|.|.|:.| :||..|:|          .:.|.|:...
  Rat   362 VEVMCFVP------KRCNDMMS-----LGRLRGFEG-KLTAQGKLLGQDTFLVTEPEAGGLLSSR 414

  Fly   756 NKQRLVLLFATMLIITKQKEDG-------RLQFKTYISQNNLMLSEHLPGEPTSF---------- 803
            .::|.|.||..::|.::....|       ...:|..|..:.|.|..:|.|....|          
  Rat   415 GRERRVFLFEQIVIFSEALGGGGRGGTQPGYVYKNSIKVSCLGLEGNLQGNACRFALTSRGPEGG 479

  Fly   804 ---YVIPFDEPRHQIKLTARNRDQKRIWTQHIKGVMLEKLDIPMRAKELVYQLGNEEDRT----- 860
               ||:...:|.           ..:.|.:.:..::..:.|. :.|.:...:....|.:|     
  Rat   480 IQRYVLQASDPA-----------VSQAWIKQVAQILESQRDF-LNALQSPIEYQRRESQTNSLGR 532

  Fly   861 --------PDRSTWKWSLHSGSN-STPTYL 881
                    |.|.. :.|:|:..| |.|:.|
  Rat   533 SGGPGVGSPGRMA-QVSMHTPINGSLPSLL 561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 57/172 (33%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 34/174 (20%)
Arhgef25NP_001387885.1 RhoGEF 203..373 CDD:459876 59/181 (33%)
PH2_Kalirin_Trio_p63RhoGEF 378..520 CDD:270061 29/154 (19%)

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