DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GEFmeso and Tiam2

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_036008.2 Gene:Tiam2 / 24001 MGIID:1344338 Length:1715 Species:Mus musculus


Alignment Length:1519 Identity:316/1519 - (20%)
Similarity:506/1519 - (33%) Gaps:553/1519 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RWEDFFGSSTELAPSLLGIYDTL-TNSFAAGGVAAAPTATSHESKASSSGDSTPKRSNSNCSSSS 75
            :|:.::   ..|....|..|:|. .||....  :|...|...|.....|....||:.:..|.|: 
Mouse   532 KWKQYW---VTLKGCTLLFYETYGKNSTEQN--SAPRCALFAEDSIVQSVPEHPKKEHVFCLSN- 590

  Fly    76 STGSSTGSCSSVPTSDDQSASYTL-ASSSTHLGHQEPPAPLVVAGLRDEPDG---------AQLS 130
                   ||..|         |.. |:|.|.|.:.........|.|..:..|         :|..
Mouse   591 -------SCGDV---------YLFQATSQTDLENWVTAIHSACASLFAKKHGKEDTVRLLKSQTR 639

  Fly   131 RLVQRRSQESQIHGSSS---SIASSGSSRRG--SNIRILSPNVHRIITHSDIQPVEAVSAEALKQ 190
            .|:|:...:|::...:.   |:.|...:|:.  :.||....|:.:.  |.|:..:..        
Mouse   640 SLLQKIDMDSKMKKMAELQLSVVSDPKNRKAIENQIRQWEQNLEKF--HMDLFRMRC-------- 694

  Fly   191 HQQQSQRSPTQGRYIKTGHSGTPP------AAGSAP-KLKLSHIPLSKITGKLSTQSGSELVSTF 248
                         |:.:...|..|      ||.|.| ||.|..:      |.||..|...||.:.
Mouse   695 -------------YLASLQGGELPNPKSLLAATSRPSKLALGRL------GVLSVSSFHALVCSR 740

  Fly   249 DSSNEYLNSVAFAAFEKSK-----------------------------------------PQDED 272
            |.|.....:::.....|||                                         ||.. 
Mouse   741 DDSTLRKRTLSLTQRGKSKKGIFSSLKGLDTLARKGREKRASITQMFDSSHSHGFLGTQLPQKS- 804

  Fly   273 RTPTNKS----VPG---------------TPFHFDGHPFQGRKLTL-PRYDSQQSIKLI-EMEQL 316
             |.:||:    :.|               |..||..:  :|..:|: |.:..:..:.|: :|.||
Mouse   805 -TNSNKAHDLHLYGSAVDSALRDSMWEVQTYVHFQDN--EGVTVTIKPEHRVEDVLALVCKMRQL 866

  Fly   317 AATSAQLLHAKPATPGTPATPTPSATKAKEFVCSE----PLSPVDIVDTINFDLV---------- 367
            ..|...|...|.................:|.|..|    |||..|:..|...|:.          
Mouse   867 EPTHYGLQLRKVVDKSVEWCVPALYEYMQEQVYDEIEVFPLSVYDVQLTKTGDMTDFGFAVTVQV 931

  Fly   368 --AQHMERLTLAD--PGDL-----------------DPRAEL----IEA------VNKTLVNKPL 401
              .||:.|:.::|  |..|                 :|.::|    :||      |..|||.:| 
Mouse   932 DEHQHLNRIFISDVLPDSLAYGGGLRKGNEITSLNGEPVSDLDIQQMEALFSEKSVGLTLVARP- 995

  Fly   402 VRSSSAACASTICSSPLLTYAR-TKSLGAKASTLGGGVPIKLPTAEQLAELEEANKLSAESLDRL 465
            |.:....|||...|.   .::| .|||...            |...||.|         |.||..
Mouse   996 VTTRRTLCASWSDSD---LFSRDQKSLPPS------------PNQSQLLE---------EFLDNF 1036

  Fly   466 TDIKPKFAARLSELARLNNRPLSSSSICSTSSSSSSGS-DQLLNGKLMATSYLASVESLAESENE 529
                     |.:..:..:|.|..::.:   ..|.:.|: ||:.:.:.|..::| |.:.:||...:
Mouse  1037 ---------RKTATSDFSNVPEITTGL---KRSQTEGTLDQVPHREKMEQTFL-SADQIAELCRD 1088

  Fly   530 LG-----------DQHHPPAMSV---------LEKTCLEIVDSERSFVEDLGQVIKGYLQDWKER 574
            |.           :.|.||...:         |.|...|:||:|:|:|:||..:.:.||:..:..
Mouse  1089 LNNTHTNSMEAPTESHDPPPRPLARHLSDADRLRKVIQELVDTEKSYVKDLSCLFELYLEPLQNE 1153

  Fly   575 ACLRVDELQILFANIEEIYEFNSMLLQRL---INTGRD------PGRIAR-------CFIDLRDG 623
            ..|..||::.||.::.|:.||..:.|:.|   |:...|      |.:..:       .|:...|.
Mouse  1154 TFLTQDEMESLFGSLPEMLEFQKVFLETLEDAISASSDFSVLETPSQFRKLLFSLGGSFLYYADH 1218

  Fly   624 FDVYTTYCTSYPEAISLLTKLLQATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSL 688
            |.:|:.:|.::.:...:|.:........:.|.:.....||...|.|||:|||||:|||.|||..|
Mouse  1219 FKLYSGFCANHIKVQRVLERAKTDKAFKAFLDARNPTKQHSSTLESYLIKPVQRVLKYPLLLKEL 1283

  Fly   689 --------RKHCDVKEVVEAHVIMRQVAHNIDQVKR------------KQEQQSRVKELSGILDG 733
                    .:|..:.|.::|   |.:||.:|:::::            ..||....||::.:..|
Mouse  1284 VSLTDHESEEHYHLTEALKA---MEKVASHINEMQKIYEDYGMVFDQLVAEQSGTEKEVTELSMG 1345

  Fly   734 ---------WLGPELTVLGELRQEGLLMEQHNKQRLVLLFATMLIITKQKEDGRLQFKTYISQNN 789
                     ||.|.|: ||:.|::        .:..|.:|...:|:              :.:.|
Mouse  1346 ELLMHSTVSWLNPFLS-LGKARKD--------IELTVFVFKRAVIL--------------VYKEN 1387

  Fly   790 LMLSEHLPGEPTSFYVIPFDEPRHQIKLTARNRDQKRIWTQHIKGVMLEKLDIPMRAKELVYQLG 854
            ..|.:.||..         ..|.|.   :|.....|..|.            ||:.|  |..:||
Mouse  1388 CKLKKKLPSN---------SRPAHN---SADLDPFKFRWL------------IPISA--LQVRLG 1426

  Fly   855 NEEDRTPDRSTWKWSLHSGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQ 919
            |... |.:.|||: .:|:                :|||..|     .:|:......||.|::   
Mouse  1427 NTAG-TENNSTWE-LIHT----------------KSEIEGR-----PETIFQLCCSDSENKT--- 1465

  Fly   920 EEESISQAKPSKPLARNNSLDDTALQKLAAAMRYRKRDAAVKEETKTPVKEPCKCDQDAKQDERI 984
                 |..|..:.:.|.|               :|:.   :|.|  .|:::.|| |:......|:
Mouse  1466 -----SIVKVIRSILREN---------------FRRH---IKCE--LPLEKTCK-DRLVPLKNRV 1504

  Fly   985 EPCSCILRDQRS-----RSAKSQSPVFSYKALKERSKSVPRIGGFSLDEEAEREREQDEDSAASL 1044
             |.|..|...||     .|:.|:.|       .|.||      |.|||.:........:.|...:
Mouse  1505 -PVSAKLASSRSLKGLRTSSSSEWP-------SEPSK------GNSLDSDECSLSSGTQSSGCPV 1555

  Fly  1045 RGSKPDLSERKTKGKGFFEVKQYNHKTMPKKIANLKKQRSSTTKSCSRFYMDLSEFDSSSSTVLK 1109
            ..|:.|                       .|...|:|....          .|:||         
Mouse  1556 AESRRD-----------------------SKSTELEKDAQE----------GLAEF--------- 1578

  Fly  1110 ITESTEELRPDGEIELAQEAATLDESTQDQYYSPDHETELLSPAEKSKRDAQIVLDLLKNSKEFE 1174
                     |||   |.:|:..|.:..:|.:    |..:..||.    :|.:|....||.|:   
Mouse  1579 ---------PDG---LIKESDILSDEDEDFH----HPLKQGSPT----KDIEIQFQRLKISE--- 1620

  Fly  1175 RIYNKQQKRRESPVSPVSPDISRGPILPPPRPPSRSPPPLELEEQEKKPVEEVDSVSEEPIYETL 1239
                      ||.|.||.                 ..|..|..||.|                 |
Mouse  1621 ----------ESDVHPVG-----------------QQPLTESGEQPK-----------------L 1641

  Fly  1240 LRNVHVPYKFSPVLGRAKSSQ-----ILKKRSKTAPAASRPESDYVTLVYSPEGVLQRVGEEVVQ 1299
            :|.     .|.|:..:|.|::     :||.:::.....|.||:..:.|            ..|::
Mouse  1642 VRG-----HFCPIKRKANSTKRGRGTLLKAQTRHQSLDSHPETASIDL------------NLVLE 1689

  Fly  1300 RDSCSSSTTS---------TSSNG 1314
            |:....|.||         |.|:|
Mouse  1690 REFSVQSLTSVVNEEGFYETQSHG 1713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 54/187 (29%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 30/165 (18%)
Tiam2NP_036008.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 174..249
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 263..294
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 385..418
PH1_Tiam1_2 503..629 CDD:269937 26/118 (22%)
Tiam_CC_Ex 643..740 CDD:408184 26/125 (21%)
RBD 832..902 CDD:128731 15/71 (21%)
PDZ_canonical 911..994 CDD:467153 17/82 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1092..1113 3/20 (15%)
RhoGEF 1124..1313 CDD:214619 55/191 (29%)
PH2_Tiam1_2 1315..1487 CDD:269957 51/271 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1515..1582 23/133 (17%)
Blue background indicates that the domain is not in the aligned region.

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