DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and Arhgef9

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001392830.1 Gene:Arhgef9 / 236915 MGIID:2442233 Length:537 Species:Mus musculus


Alignment Length:471 Identity:111/471 - (23%)
Similarity:201/471 - (42%) Gaps:85/471 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   521 ESLAESENELGDQHHPPAMSVLEKTCL----------------EIVDSERSFVEDLGQVIKGYLQ 569
            :.:.|..:::.:.|..|....|   ||                ||:.:||.:::.|..:.:|||:
Mouse    91 DGVEEGPSDVQNGHLDPNSDCL---CLGRPLQNRDQMRANVINEIMSTERHYIKHLKDICEGYLK 152

  Fly   570 DWKERACLRVDE-LQILFANIEEIYEFNSML---LQRLINTGRDP--GRIARCFIDLRDGFDVYT 628
            ..::|..:..|| |:::|.|||:||.|....   |::..|.. ||  ..|..||::.:|||.:|:
Mouse   153 QCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNND-DPHLSEIGPCFLEHQDGFWIYS 216

  Fly   629 TYCTSYPEAISLLTKLLQATHTYSLLASTQKLLQHRLPLG--SYLLKPVQRILKYHLLLDSLRK- 690
            .||.::.:|...|:||::.:. |.......:|||..:.:.  .:||.|||:|.||.|.|..|.| 
Mouse   217 EYCNNHLDACMELSKLMKDSR-YQHFFEACRLLQQMIDIAIDGFLLTPVQKICKYPLQLAELLKY 280

  Fly   691 ----HCDVKEVVEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGILDGWLG-------PELTVLGE 744
                |.|.:.|..|..:||.|...|::.||:.|...::.:....:..|.|       .||...||
Mouse   281 TAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQWQASVLDWEGEDILDRSSELIYTGE 345

  Fly   745 L----RQEGLLMEQHNKQRLVLLFATMLIITKQKEDGR--LQFKTYISQNNLMLSEHLPGEPTSF 803
            :    :..|     .|:||:..||...:::.|:....|  |.:|..|..:...:.:...|....|
Mouse   346 MAWIYQPYG-----RNQQRVFFLFDHQMVLCKKDLIRRDILYYKGRIDMDKYEVIDIEDGRDDDF 405

  Fly   804 YVIPFDEPRHQIKL-----------TARNRDQKRIWTQHIKGVMLEKLDIPMRAKELVYQLGNEE 857
            .|    ..::..||           .|:..::|..|.:..:    |:..:....:::.:::...:
Mouse   406 NV----SMKNAFKLHNKETEEVHLFFAKKLEEKIRWLRAFR----EERKMVQEDEKIGFEISENQ 462

  Fly   858 DRTPDRSTWKWSLHSGSNST----PTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLE 918
            .|....:..|.|...|.||.    |:|...::...:.:....:.      :|.|..|: |.|...
Mouse   463 KRQAAMTVRKASKQKGVNSARSVPPSYPPPQDPLNQGQYLVPDG------IAQSQVFE-FTEPKR 520

  Fly   919 QEE---ESISQAKPSK 931
            .:.   ::.|:..|.|
Mouse   521 SQSPFWQNFSRLTPFK 536

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 59/176 (34%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 34/168 (20%)
Arhgef9NP_001392830.1 SH3_ARHGEF9 28..89 CDD:212908
RhoGEF 128..307 CDD:214619 60/180 (33%)
PH_Collybistin_ASEF 312..451 CDD:269931 27/151 (18%)
Blue background indicates that the domain is not in the aligned region.

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