DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and Vav1

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_035821.3 Gene:Vav1 / 22324 MGIID:98923 Length:845 Species:Mus musculus


Alignment Length:894 Identity:175/894 - (19%)
Similarity:302/894 - (33%) Gaps:286/894 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   388 LIEAVNKTLVN-KPLVRSSSAACASTICSSPLLTYART--KSLGAKASTLGGGVPIKLPTAEQLA 449
            |.:|:|...|| :|.:       :..:|...:.|:..|  :..|.|.|.|               
Mouse    51 LPQAINLREVNLRPQM-------SQFLCLKNIRTFLSTCCEKFGLKRSEL--------------- 93

  Fly   450 ELEEANKLSAESLDRLTDIKPKFAARLSELARLNNRPLSSSSICSTSSSSSSGSDQLLNGKLMAT 514
                     .|:.| |.|:: .|...:..|:.|:..|::.:.    ........|..||.:.:.:
Mouse    94 ---------FEAFD-LFDVQ-DFGKVIYTLSALSWTPIAQNK----GIMPFPTEDSALNDEDIYS 143

  Fly   515 SYLASVESLAESENEL----------GDQHH-----------PPAMSVLEKTCL---EIVDSERS 555
            .....::..||.:.:|          ||:.:           ||.|:..:|.|.   ||..:|..
Mouse   144 GLSDQIDDTAEEDEDLYDCVENEEAEGDEIYEDLMRLESVPTPPKMTEYDKRCCCLREIQQTEEK 208

  Fly   556 FVEDLGQVIKGYLQDWKERACLRVDELQILFANIEEIYEFNSMLLQRLINTGRDPG--RIARCFI 618
            :.:.||.:.:.:::..:.  .|:..:::.:|.||||::..::..|:.|.:....||  .:.:.||
Mouse   209 YTDTLGSIQQHFMKPLQR--FLKPQDMETIFVNIEELFSVHTHFLKELKDALAGPGATTLYQVFI 271

  Fly   619 DLRDGFDVYTTYCTSYPEAISLLTKLLQATH--TYSLLASTQKLLQHRLPLGSYLLKPVQRILKY 681
            ..::.|.||..||:....|...|.::..|..  ...|...:|:....|..|...|:.|:||:|||
Mouse   272 KYKERFLVYGRYCSQVESASKHLDQVATAREDVQMKLEECSQRANNGRFTLRDLLMVPMQRVLKY 336

  Fly   682 HLLLDSLRKHC-DVKEVVEAHV---IMRQVAHNIDQVKRKQEQ-------QSRVKELSGILDGWL 735
            ||||..|.||. |..|.....:   .||.:|..:::|||..|.       |..::.|...|..:.
Mouse   337 HLLLQELVKHTQDATEKENLRLALDAMRDLAQCVNEVKRDNETLRQITNFQLSIENLDQSLANYG 401

  Fly   736 GPELTVLGELRQEGLLMEQHNK-QRLVLLFATMLIITKQKEDGRLQFKTYISQNNLMLSEHLPGE 799
            .|::.  |||:...  :|:.:| .|...|....|:|.|::.|. ...|..::.::..:.:...||
Mouse   402 RPKID--GELKITS--VERRSKTDRYAFLLDKALLICKRRGDS-YDLKASVNLHSFQVRDDSSGE 461

  Fly   800 P-----TSFYVIPFDEPRHQIKLTARNRDQKRIWTQHIKGVMLEKLDIPMRAKELVYQLGNEEDR 859
            .     :..:::..|:.....:|..:.|:.|:.|        :|:.::.:               
Mouse   462 RDNKKWSHMFLLIEDQGAQGYELFFKTRELKKKW--------MEQFEMAI--------------- 503

  Fly   860 TPDRSTWKWSLHSGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQEEESI 924
                          ||..|     .||                 .||...|..|:      .|..
Mouse   504 --------------SNIYP-----ENA-----------------TANGHDFQMFS------FEET 526

  Fly   925 SQAKPSKPLARNNSLDDTALQKLAAAMRYRKRDAAVKEETKTPVKEPCKCDQDAKQDERIEPC-- 987
            :..|..:.|.|.     |..|....   ||.|..|.||         |.        .|:.||  
Mouse   527 TSCKACQMLLRG-----TFYQGYRC---YRCRAPAHKE---------CL--------GRVPPCGR 566

  Fly   988 ------SCILRDQRSRSAKSQSPVFSYKALKERSKSVPRI-------------GGFS-------- 1025
                  ..:.:|:..|.|:.:         |.....:|::             |.|.        
Mouse   567 HGQDFAGTMKKDKLHRRAQDK---------KRNELGLPKMEVFQEYYGIPPPPGAFGPFLRLNPG 622

  Fly  1026 -----LDEEAEREREQDEDSAAS-------------LRGSKPDLS---------ER-------KT 1056
                 ...|||....:..::|.:             :.|...|||         ||       ..
Mouse   623 DIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYVHGPPQDLSVHLWYAGPMERAGAEGILTN 687

  Fly  1057 KGKGFFEVKQ-------------YNHKTMPKKIANLKKQRSSTTKSCSRFYMDLSEFDSSSSTVL 1108
            :..|.:.|:|             ||.:....||...:.....|.|...|..::|.||...:|   
Mouse   688 RSDGTYLVRQRVKDTAEFAISIKYNVEVKHIKIMTSEGLYRITEKKAFRGLLELVEFYQQNS--- 749

  Fly  1109 KITESTEELRPDGEIELAQEAATLDESTQDQYYSPDHETELLSPAEKSK 1157
                            |.....:||.:.|..|..|:.......||..:|
Mouse   750 ----------------LKDCFKSLDTTLQFPYKEPERRAISKPPAGSTK 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 48/171 (28%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 31/160 (19%)
Vav1NP_035821.3 CH_VAV1 2..121 CDD:409111 21/102 (21%)
RhoGEF 195..371 CDD:238091 49/177 (28%)
PH_Vav 385..508 CDD:269930 26/164 (16%)
C1_VAV1 510..566 CDD:410417 22/103 (21%)
SH3_VAV1_1 596..658 CDD:212912 6/61 (10%)
SH2_Vav1 665..767 CDD:198268 24/120 (20%)
SH3_VAV1_2 786..839 CDD:212909
Blue background indicates that the domain is not in the aligned region.

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