DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and SPATA13

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:NP_001273721.1 Gene:SPATA13 / 221178 HGNCID:23222 Length:1339 Species:Homo sapiens


Alignment Length:1076 Identity:239/1076 - (22%)
Similarity:362/1076 - (33%) Gaps:329/1076 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 DSDTSERWEDFFGSSTELAPSLLGIY------------DTLTNSFAAGGVAAA-------PTATS 51
            |....|..:|.|..||..:.||...|            :..|.:.|.|.|.|.       |...|
Human   244 DGSDLEDTDDAFQRSTHRSRSLRRAYGLGRICLLDAPQNHATPTIATGQVPAVCEILVRDPENNS 308

  Fly    52 HESKASSSGD--------STPKRSNSNCS---------------SSSSTGSS------TGSCSSV 87
            ...:.|.|.|        |..::|.||.:               |||||.|.      |....|.
Human   309 MGYRRSKSTDNLAFLKKSSFKRKSTSNLADLRTAHDARVPQRTLSSSSTDSQKLGSGRTKRWRSP 373

  Fly    88 PTSDDQSASYTLASSSTHLG-HQEPP---APLVVAGLRDEPDGAQL------------SRLVQRR 136
            ..:.|....:.|.|:.|... .:|.|   ||        .|..|.|            ||.|.|.
Human   374 IRAKDFDRVFKLVSNVTEAAWRRESPRSGAP--------SPGEASLRLQAHSRLHDDYSRRVSRS 430

  Fly   137 SQESQ------IHGS--------------------------------SSSIASSGSSRRGSNI-- 161
            :::..      :||:                                ||....|.||...|::  
Human   431 TEQDSRRGGAVMHGTTATCTVAPGFGSATSKGPHLDADTAVFPLETKSSWAVESDSSCTCSSLPS 495

  Fly   162 ----RILS-----PNVHRIITHSDIQPVEAVSAEALKQHQQQSQRSPTQG-RYIKTGHSGTPPAA 216
                .:||     ||....:|....||...:.....|....||.:||..| ....:.||..  :|
Human   496 PIVQDVLSKDSCDPNAGSQLTFDPEQPPTPLRPTTPKPQSPQSPQSPGAGSASCHSNHSAL--SA 558

  Fly   217 GSAPKLKLSHIPLSKITGKLSTQSGSELVSTFDSSNEYLNSVAFAA---------------FEKS 266
            .|......:..|..:..|.:|.|...|.....:.|.:.|.::..||               :.:|
Human   559 NSEESEGRAEEPAQREPGPVSLQDPLEATHGDEGSKDLLVNIGVAAGPEEKEKEEVVPDGPWRRS 623

  Fly   267 KPQDEDRTPTNKSVPGTPFHFDG-------HPFQ------GRKLTLPR----YDSQQSIKLIEME 314
            ..|||:||...:    ||....|       .||.      .|.|::|.    .|.|:..::.|..
Human   624 SSQDEERTEAQR----TPKRRWGSGRRPRPRPFSDYGQLASRSLSIPEDSVAADPQKEDRVDEDP 684

  Fly   315 QLAATSA---------------------------------------QLLHAKPATPGTPATPTP- 339
            |.:.|||                                       .||....:.|..||...| 
Human   685 QASMTSASPEDQNAPVGCPKGARRRRPISVIGGVSLYGTNQTEELDNLLTQPASRPPMPAHQVPP 749

  Fly   340 -SATKAK----EFVCSEPL----------------------SPVDIVDTINFDLVAQHMERLTLA 377
             .|..|:    .|..|.|:                      .|..:||. |........|.|..|
Human   750 YKAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTEPSALVDD-NGSEEDFSYEDLCQA 813

  Fly   378 DPGDLDPRAELIEAVNKTLVNKPLVRSSSAACASTICSSPLLTYARTKSLGAKASTLGGGVPIKL 442
            .|..|.|..|.: |:|:      |:...:..||..:.....:.   .:.||.||           
Human   814 SPRYLQPGGEQL-AINE------LISDGNVVCAEALWDHVTMD---DQELGFKA----------- 857

  Fly   443 PTAEQLAELEEANKLSAESLD----RLTDIKPKFAARLSELARLNNRPLSSSSICSTSSSSSSGS 503
              .:.:..||.:||      |    |..|.:..|.|....| |:|...||.:|    ||:.|...
Human   858 --GDVIQVLEASNK------DWWWGRSEDKEAWFPASFVRL-RVNQEELSENS----SSTPSEEQ 909

  Fly   504 DQLLNGKLMATSYLASVESLAESENELGDQHHPPAMSVLEKTCLEIVDSERSFVEDLGQVIKGYL 568
            |                |..::|.:    :|......:......||:|:||.:::.|..:.:||:
Human   910 D----------------EEASQSRH----RHCENKQQMRTNVIREIMDTERVYIKHLRDICEGYI 954

  Fly   569 -QDWKERACLRVDELQILFANIEEIYEFNSMLLQRLIN--TGRDP--GRIARCFIDLRDGFDVYT 628
             |..|......|.:|..:|.|||:||:|....|:.|..  ...:|  ..|..||:..::||.:|:
Human   955 RQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFLQNQEGFAIYS 1019

  Fly   629 TYCTSYPEAISLLTKLLQA---THTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSLRK 690
            .||.::|.|...|..|::.   .|.:......|:::.  :.:..:||.|||:|.||.|.|..|.|
Human  1020 EYCNNHPGACLELANLMKQGKYRHFFEACRLLQQMID--IAIDGFLLTPVQKICKYPLQLAELLK 1082

  Fly   691 -----HCDVKEVVEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGILDGWLG-------PELTVLG 743
                 |.|...:..|:..|:.||..|::.|||.|...::......:.||.|       .||...|
Human  1083 YTTQEHGDYSNIKAAYEAMKNVACLINERKRKLESIDKIARWQVSIVGWEGLDILDRSSELIHSG 1147

  Fly   744 ELRQEGLLMEQHNKQRLVLLFATMLIITKQ---KEDGRLQFKTYISQNNLMLSEHLPGEPTSFYV 805
            ||.:  :..:..::||...||...|:..|:   :.| .|.:|..:..:.:.|.:...|......:
Human  1148 ELTK--ITKQGKSQQRTFFLFDHQLVSCKKDLLRRD-MLYYKGRLDMDEMELVDLGDGRDKDCNL 1209

  Fly   806 IPFDEPRHQIKLTARNRDQ-----------KRIWTQ 830
                ..::..||.:|..|:           |..|.|
Human  1210 ----SVKNAFKLVSRTTDEVYLFCAKKQEDKARWLQ 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 54/176 (31%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 35/158 (22%)
SPATA13NP_001273721.1 SH3_ASEF 821..892 CDD:212906 20/100 (20%)
RhoGEF 931..1110 CDD:214619 55/180 (31%)
PH_Collybistin_ASEF 1115..1253 CDD:269931 27/134 (20%)

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