DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and Plekhg1

DIOPT Version :9

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_006512502.1 Gene:Plekhg1 / 213783 MGIID:2676551 Length:1487 Species:Mus musculus


Alignment Length:1521 Identity:334/1521 - (21%)
Similarity:565/1521 - (37%) Gaps:480/1521 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   375 TLADPGDLDPRAELIEAVNKTLVNKPLVRSSSAACAST-------------ICSSPLLTYARTKS 426
            |.|:|.: .|..:.:|..:.   ::|:...|:::.||:             :.:|.|..:.:.|.
Mouse    85 TTAEPSE-SPEPKTMELSDS---DRPISFGSTSSSASSRDSHGSFGSRMTLVSNSHLGLFHQDKE 145

  Fly   427 LGAKASTLGGGVPIKLPTAEQLAELEEANKLSAESLDRLTDIKPKFAARLSELARLNNRPLSSSS 491
            .||          |||       ||..|...|:..|.|.....|:....:||........:.:|.
Mouse   146 AGA----------IKL-------ELVPARPFSSSELQRDKPAGPQNMNGVSEKQPRTPWRMDTSG 193

  Fly   492 ICSTSSSSSSGSDQLLNGKLMATSYLASVESLAESENELGDQHHPPAMSVLEKTCLEIVDSERSF 556
            ...|::.|             |||                     |.:..:::...||:::||::
Mouse   194 TPQTTADS-------------ATS---------------------PKLLYVDRVVQEILETERTY 224

  Fly   557 VEDLGQVIKGYLQDWKERACLR--------VDELQILFANIEEIYEFNSMLLQRLINTGRDPGRI 613
            |:||..:::|||:      |:|        .::...||.||::||.|||.|||.|.|...||..|
Mouse   225 VQDLKSIVEGYLE------CIRDQTKLPLVTEDRAALFGNIQDIYHFNSELLQDLENCENDPVAI 283

  Fly   614 ARCFIDLRDGFDVYTTYCTSYPEAISLLTKLLQATHTYSLLASTQKLLQHRLPLGSYLLKPVQRI 678
            |.||:...:.|.:||.|||:||.::::||:.::...........|:.|:|.||||||||||||||
Mouse   284 AECFVSKSEEFHIYTQYCTNYPRSVAVLTECMRNKILTKFFRERQETLRHSLPLGSYLLKPVQRI 348

  Fly   679 LKYHLLLDSLRKHCD-----VKEVVEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGILDGWLGPE 738
            |||||||..:..|.|     ...|::|...|::||.:|:.:|||.|...|::|:..:|..|.||:
Mouse   349 LKYHLLLHEIENHLDKATEGYDVVLDAIDTMQRVAWHINDMKRKHEHAVRLQEIQSLLTNWEGPD 413

  Fly   739 LTVLGELRQEGLL-MEQHNKQRLVLLFATMLIITKQKEDGRLQFKTYISQNNLMLSEHLPGEPTS 802
            ||..|||..||.. :::..|:|.:.|...:|:|||:::| ...:|.:|...||||.|.:|.||.|
Mouse   414 LTSYGELVLEGTFRIQKAKKERTLFLLDQLLLITKKRDD-TFTYKAHILCGNLMLVEVIPKEPLS 477

  Fly   803 FYVIPFDEPRHQIKLTARNRDQKRIWTQHIKGVMLEK----LDIPMRAKELVYQLGNEEDRTPDR 863
            |.|..:..|:.|..:.|:::..||:|..|:|.::||.    ..||.:||:.:.::.         
Mouse   478 FSVFHYKNPKLQHTVQAKSQQDKRLWVLHLKRLILENHAAAAKIPAKAKQAILEMD--------- 533

  Fly   864 STWKWSLH--------SGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANSSSFDSFNESLEQE 920
                 ::|        .|...||.........|:||...|:.|. .||...|......:     .
Mouse   534 -----AIHYPGFCYSPEGEMKTPCGSAPHRLRRKSEPSSRSHKV-LKTSETSQDIQKVS-----R 587

  Fly   921 EESISQAKPSKPLARNNSLDDTALQKL---AAAMRYRKRDAAVKEETKTPVKEPC---------- 972
            |||.||...:.|..||......|:..:   ...:|....|..:::.|...:::|.          
Mouse   588 EESPSQLTSAVPAQRNCQPGSAAVINMLRGGGGVRSPWTDHHIRQRTDHHIRQPLFPSRRSPQEN 652

  Fly   973 -----------------------KCDQDAKQDERIEPCSCIL-------------RDQRSRSAKS 1001
                                   .|:::|..    .|||..|             |..|..|:..
Mouse   653 EDDDDDYQMFVPSFSSSDLNSTRLCEENASS----RPCSWHLGLIEPTEISSSGHRIVRRASSAG 713

  Fly  1002 QS----PVFSYKALKE-------RSKSVPRIGG------------------------FSLDEEAE 1031
            :|    |....:...:       :.::.||.||                        .|.::...
Mouse   714 ESNACPPEVRIRDCDDSQYCPGRQLQNSPRPGGERGMTPYGSSVELTIDDIDHVYDNISFEDLKL 778

  Fly  1032 REREQDEDSAASLRGSKPDLSERKTKGKGFFEVKQYNHKTM---PKKIANLKKQRSSTTKSCSRF 1093
            ...::||...:..:.|:..:..:.|....|.: :|.:|.|.   .:|.|.|..|.:||.......
Mouse   779 MVAKRDETECSFSKPSRDSVRPKSTPELAFSK-RQVSHSTSSLHSRKEAGLGGQEASTQSVHEHQ 842

  Fly  1094 YMDLSEFDS-----------SSSTVLKITEST-----------EELRPDGEIELAQEAATLDEST 1136
            .::.:.:|:           :.|::.:...||           :.|||    .::|::....|..
Mouse   843 EVEENIYDTIGLPDPPSMNLNHSSLHQPKRSTFLGLEADFACCDSLRP----FVSQDSLQFSEDD 903

  Fly  1137 QDQYYSPDHETELLSPAEKSKRDAQIVLDLL---KNSKEFERIYN--------KQQKRRESPVS- 1189
            ...:..|. :||.||....|.|....:.|..   |.|:|.:.|:|        .:.|.|:..:: 
Mouse   904 ISYHQGPS-DTEYLSLLYDSPRCNLPIADKALSDKLSEEVDEIWNDLENYIKKNEDKSRDRLLAA 967

  Fly  1190 -PVSPD----------------------------ISRGPILP----------------------- 1202
             |||.|                            .|:..:||                       
Mouse   968 FPVSKDDAPERLYVDSTHELGRDTGHATSMLALPTSQTFLLPGKSRVVRASRANCSLDNDIISTE 1032

  Fly  1203 ------------PPRPPSRSPPPL------ELEEQEKKPVEEVDSVSEEPI------YETLLRNV 1243
                        ...||..:|..|      :.:.:...|..||...::..:      |...::.|
Mouse  1033 GSFLSLNQLSLASDGPPVDNPYDLANCSLPQTDPENPDPGMEVTDKTKSRVFMMARQYSQKIKKV 1097

  Fly  1244 HVPYKF-SPVLGRAKSSQ----------ILKKRSKTAPAASRPESDYVTLVYSPEGVLQRVGEEV 1297
            :...|. ||.|.:..|||          ||:::.:..||.....::|..|.           :::
Mouse  1098 NQILKVKSPELEQPPSSQHRPSHKDLVAILEEKRQGGPAIGARIAEYSQLY-----------DQI 1151

  Fly  1298 VQRDSCSSSTTSTSSNGSGSTLKRD-------------------SQSTVINLLMEAAQEHESR-P 1342
            |.|::...:.....::..|.||.|.                   |...:.:...:..|:.:|: |
Mouse  1152 VFRETPLKAQKDGWASPQGPTLHRPVSPPQAQGAGEDWLWHSPYSNGELADFSPQTEQDSKSKYP 1216

  Fly  1343 LPKNSVSGSESSLLPRALKSIDNLSMAFGRSNRPPERRVSD-----VSEMCR------------Q 1390
            :...|.    :.:.||.|....::          |..:|||     |.:.|.            |
Mouse  1217 ITLEST----TKIRPRQLSGACSV----------PSLQVSDPLLGSVQQRCSVVVSQPHKENSGQ 1267

  Fly  1391 SVLHRQ-GSEAVGERMAHVDYADPKALF------GLGVLNH-SERDSVFSLTSSSSD-------- 1439
            |.|:.. |.:|:..:..  .|:.|::..      .|..:|: ||.::...|:|..|.        
Mouse  1268 SPLYNSLGRKAISAKPQ--PYSRPQSSSSILINKSLDSINYPSETETKQLLSSQKSPRGASQQDL 1330

  Fly  1440 -----SMCEQQR-KRSGVGATFEYEQQV-----------EDSLEN---DFRDSAIYSDDN-EKRS 1483
                 :.|:|.| |||.:  |.:..|:|           :.:.:|   :|:|.....||. |.:|
Mouse  1331 PSGLANSCQQDRGKRSDL--TLQDSQKVLVVNRNLPLSAQIATQNYFCNFKDPEGDEDDYVEIKS 1393

  Fly  1484 GDYDVHL------RRPSSPPPPPP-----------------PLGPRPHQPPQI------------ 1513
            .:.:|.|      .|.|.|..|.|                 |:..|...||.:            
Mouse  1394 EEDEVRLDLSPRRGRKSDPQTPDPDCSDSICSHSTPYSLKEPVSGRLGLPPYLTACKDSDKLNDY 1458

  Fly  1514 ---APKPSKDQLIQQRSGVIVCQSAS 1536
               .|.|::..::|.......|.|:|
Mouse  1459 LWRGPSPNQQNIVQSLREKFQCLSSS 1484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..713 CDD:279015 74/177 (42%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 53/145 (37%)
Plekhg1XP_006512502.1 RhoGEF 211..387 CDD:238091 73/181 (40%)
PH_PLEKHG1_G2_G3 369..514 CDD:270063 53/145 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 140 1.000 Domainoid score I4732
eggNOG 1 0.900 - - E1_KOG3518
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 214 1.000 Inparanoid score I3617
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004049
OrthoInspector 1 1.000 - - otm43616
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45924
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1291
SonicParanoid 1 1.000 - - X3795
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.950

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