DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and plekhg1

DIOPT Version :9

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_021325545.1 Gene:plekhg1 / 101886810 -ID:- Length:1513 Species:Danio rerio


Alignment Length:1216 Identity:279/1216 - (22%)
Similarity:480/1216 - (39%) Gaps:316/1216 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 AARLSELARLNNRPLSSSSICSTSSSSSSGSDQLLNGKLMATS-------------YLASVESLA 524
            ::|..:....::||:|..|  ::||:||..|...|.|:.:..|             .|.....|.
Zfish    42 SSRSMDSTHCSDRPVSYGS--TSSSASSRDSHCSLGGRPVLGSTPERDRDSGAIRLELVPARQLE 104

  Fly   525 ESE----------NELGDQHHPPAMSV--LEKTCLEIVDSERSFVEDLGQVIKGYLQDWKERACL 577
            |.|          |:..:...|....|  :::...||:::|:::|:||..:::.||.....::.|
Zfish   105 EEEESGRKTRKLTNQDAEIQSPEGRKVQYVDRVVEEILETEKTYVQDLRSIVQDYLDCISNQSLL 169

  Fly   578 RV--DELQILFANIEEIYEFNSMLLQRLINTGRDPGRIARCFIDLRDGFDVYTTYCTSYPEAISL 640
            .:  :|...||.||.:||.|||.||:.|.....:|..||:||:...:.|.:||.|||:||.::::
Zfish   170 LLGDEERNSLFGNIRDIYRFNSELLRDLEKCNANPVAIAKCFVAKSEDFHIYTQYCTNYPRSVAV 234

  Fly   641 LTKLLQATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSLRKHCD--------VKEV 697
            ||:.::.......|...|:.|:|.|||||||||||||||||||||..:..|.:        ::|.
Zfish   235 LTECMRNKMVAKFLRERQESLKHSLPLGSYLLKPVQRILKYHLLLHEIATHLEKDSEMYDVIQEA 299

  Fly   698 VEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGILDGWLGPELTVLGELRQEGLLMEQHNK-QRLV 761
            ::.   |::||.:|:.:|||.|...|::|:..:|..|.||:|...|||..||....|..| :|.:
Zfish   300 IDT---MQRVAWHINDMKRKHEHAVRLQEIQSLLTNWKGPDLIGYGELVLEGTFRIQRAKNERTL 361

  Fly   762 LLFATMLIITKQKEDGRLQFKTYISQNNLMLSEHLPGEPTSFYVIPFDEPRHQIKLTARNRDQKR 826
            .||..:|:|||::|: ...:|.:|...||||.|.:|.||.||.|..:..|:.|..:.|:::..|:
Zfish   362 FLFDKLLLITKKREE-TYSYKAHILCCNLMLVEVIPKEPLSFSVFHYKNPKLQHTVQAKSQQDKK 425

  Fly   827 IWTQHIKGVMLEK--LDIPMRAKELVYQLGNEEDRTPDRSTWKWSLHSGSNSTPTYLERRNACRR 889
            :|..|:|.::||.  ..||.:||:.:.::......:.:.::....:::....:|..:.|:.....
Zfish   426 MWVLHLKRLILENHPAKIPAKAKQAILEMDTANHPSFNHNSDDKRVNTKEGPSPRRVRRKTEPLS 490

  Fly   890 SEIR-----------QRNSKFKRKTVANSSSFDSFNES---LEQEEESISQAKPS----KPLARN 936
            ..::           |:.|.|....::..:|..|...|   :.:.:||:.....|    :|..::
Zfish   491 KLLKNSKHIISSPDIQKRSSFGVTLLSPVASLGSIGRSRSLVSESQESLDPGDHSDVDDEPNTQD 555

  Fly   937 -NSLDDTALQ--------------------KLAAAMRYRKRD----------AAVKEETKTP--- 967
             :..|||.|.                    .:.:..::|..|          .:::.:..||   
Zfish   556 ADDEDDTGLSSGGKLRVPGKGSRKRLNQQVSVDSIEQWRNNDLTHADLQTAKQSLQNKVITPPIL 620

  Fly   968 -VKEPCKCDQDAKQDERIE--------PCSC-ILRDQRSRSAKSQSPVFSYKALKERSKSVPRIG 1022
             |..|.:.|    .||.:.        |..| |..|.|.|.|          ....|.||     
Zfish   621 RVTAPPESD----GDEHLRAMLGTGQAPAFCNIWTDHRVRRA----------MFPTRQKS----- 666

  Fly  1023 GFSLDEEAEREREQDEDSAASLRGSKPDLSERKTKGKGFFEVKQYNHKTM--PKKIANLKKQRSS 1085
             |.:|:        |||.......::.|:|....:.         :|:|.  |::..:...:.:.
Zfish   667 -FQIDD--------DEDIYQMFLPTENDVSSHDAES---------DHETADHPERPCSWHVEPTK 713

  Fly  1086 TTKSCSRFYMDLSEFDSSSSTVLKITESTEELRPDGEIELAQEAATLDESTQDQYYSPDHETELL 1150
            |           |........||:...|..| .|.|: |:..:.:..:|...:|..|..:|....
Zfish   714 T-----------SRLGLPGRGVLRRANSFGE-EPSGQ-EIPTKQSLEEEEINNQTESSSNEISGS 765

  Fly  1151 SPAEKSKRDAQIVLDLLKN---SKEFERIYNKQQKRRES---PVSPVSPDISRGPILPPPRPPS- 1208
            |.||      |:..|.::|   :..||.:......|::.   .|..|.|.|:...|:.|....| 
Zfish   766 SSAE------QLTADDIENVYDNISFEELQAMGLIRKDQVNHAVPEVKPMIAPQVIITPTETESS 824

  Fly  1209 ----RSPPPLELEEQEKKPVE--EVDSV-SEEPIYETLLRNVHVPYKFSPVLG----RAKSSQIL 1262
                ||      ..||.:|.|  |:..| :||.:|:|::      ::..||:.    ..|.:.:|
Zfish   825 CGSNRS------SGQEGEPFETCELQIVENEENVYDTIV------FQECPVIAAPSDEGKPANVL 877

  Fly  1263 KKRSKTAPAASRPESDYVTLVYSPEGVLQRVGEEVVQRDSCSSSTTSTSSNGSGSTLKRDSQSTV 1327
                       |.|:|.:        ..|..|..|.:.:.|:.:.|..                 
Zfish   878 -----------RSEADII--------ATQNSGGFVSEENLCTKTKTDF----------------- 906

  Fly  1328 INLLMEAAQEHESRPLPKNSVSGSESSLLPRALKSID----NLSMAFGRSNRPPER-----RVSD 1383
                     ||...|   :.:..|:.|.....|:.:|    :|.....::.:.|::     .||.
Zfish   907 ---------EHPHVP---SDIETSQLSSADNTLEQVDEIWTDLENYIRKNEKKPDKLPAAFPVSG 959

  Fly  1384 VSEMCRQSVLHRQGSEAVGERMAHVDYADPKALFGLGVLNHSERDSVFSLTSSSSDSMCEQQRKR 1448
            ....|:.....::..::        .:...||        |:.......|....:||.|:.|...
Zfish   960 TDATCKTKDSPKKSCDS--------PHKAQKA--------HNSPSKTSRLQQKDNDSQCKAQESP 1008

  Fly  1449 SGVGATFEYEQQVEDSLENDFRDSAIYSDDNEKRSGDYDVHLRRPSSPPP----PPP-------- 1501
            |...                  :||..|.|:..:.....:.:..|.||.|    |||        
Zfish  1009 SKKA------------------NSAQRSSDSPCKLPLKTIPVGTPGSPNPPATKPPPALQIPIIN 1055

  Fly  1502 --------------PLGPRPHQPPQIAPKPS-----KDQLIQQRSG 1528
                          |..|....||...|:|.     :::|.:..||
Zfish  1056 LPESTLDENDGASSPAAPSIPLPPTPEPQPGTVKSIRNKLARLSSG 1101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..713 CDD:279015 68/174 (39%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 52/145 (36%)
plekhg1XP_021325545.1 RhoGEF 137..312 CDD:214619 68/177 (38%)
PH_PLEKHG1_G2_G3 293..438 CDD:270063 52/148 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 126 1.000 Domainoid score I5341
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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