DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and plekhg3

DIOPT Version :9

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_017208169.1 Gene:plekhg3 / 101886323 -ID:- Length:1467 Species:Danio rerio


Alignment Length:1340 Identity:321/1340 - (23%)
Similarity:516/1340 - (38%) Gaps:360/1340 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   430 KASTLGGGVPIKLPTAEQLAELEEANKLSAESL---DRLTDIKPKFAARLSELARLNN--RPLSS 489
            |:.::...||:.          ||:.:||..||   ||.:      ...||:.:...:  ||:|.
Zfish     4 KSQSMAHDVPMG----------EESPRLSIASLGSNDRSS------ITTLSDCSDFTDVQRPVSV 52

  Fly   490 SSICSTSSSSSSGSDQLLNGKLMATSYLASVE----------------SLAESENELGDQHHP-- 536
            .|..| |.|.||..|..|:|.:.|.   ..:|                :|.::.:....|:..  
Zfish    53 VSNIS-SGSGSSRDDVPLSGVVSAA---VPIEDNVDLELTPAANPTEPNLTQTSSHFLQQNSSNT 113

  Fly   537 ------------------PAMSVLEKTCLEIVDSERSFVEDLGQVIKGYLQDWKERACLRVDELQ 583
                              |.::.|::..:||:::||.:|.||..:::.||....:...|.:...|
Zfish   114 VNNNTSFSPFAANTMAPNPELTYLDRVVMEIIETERMYVRDLRSIVEDYLAHIIDTGDLPIKPEQ 178

  Fly   584 I--LFANIEEIYEFNSMLLQRLINTGRDPGRIARCFIDLRDGFDVYTTYCTSYPEAISLLTKLLQ 646
            :  ||.|||:||||||.|||.|.....||..|||||:...:.||:||.|||:||.:::.||..::
Zfish   179 VCALFGNIEDIYEFNSELLQSLDMCDSDPVAIARCFVIKSEYFDIYTQYCTNYPNSVAALTDCMR 243

  Fly   647 ATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSLRKHCDVKE-----VVEAHVIMRQ 706
            ...........|..|:..|||||||||||||||||||||..:.||.|.:|     |.||...|..
Zfish   244 NKTLAKFFRERQATLKRSLPLGSYLLKPVQRILKYHLLLQEIAKHFDPQENGYEVVEEAIYTMTG 308

  Fly   707 VAHNIDQVKRKQEQQSRVKELSGILDGWLGPELTVLGELRQEG-LLMEQHNKQRLVLLFATMLII 770
            ||..|:.:|||.|...|::|:..:|..|.||:||..|||..|| ..:.:...:|.:.||..||:|
Zfish   309 VAWYINDMKRKHEHAVRLQEVQSLLINWKGPDLTTYGELVLEGSFRIHRAKNERTLFLFDRMLLI 373

  Fly   771 TKQKEDGRLQFKTYISQNNLMLSEHLPGEPTSFYVIPFDEPRHQIKLTARNRDQKRIWTQHIKGV 835
            ||::.: ...:||:||.:.|||.|... :...|.|..:..|:....:.||..::|::|..|||.:
Zfish   374 TKRRGE-HYVYKTHISCSTLMLIESAK-DSLCFSVTHYKHPKQPHTVQARTLEEKKLWAHHIKRL 436

  Fly   836 MLE--KLDIPMRAKELVYQLGNEEDR---TPDRSTWKWSLHSGSNSTPTYLE-------RRNACR 888
            ::|  :..||.:|||.:.::.:...:   :|:|  .|.|:...|.....:.:       .:.|.:
Zfish   437 IIENHQAVIPQKAKEAILEMDSIYKKYRYSPER--LKKSVSCQSEEFSNFRQGLKQPEASKEALK 499

  Fly   889 RSEIRQRNS---------KFKRKTVANSSSFD------SFNESLEQEEESISQAKP---SKP--- 932
            .::..|::|         |:..:...:.||.|      |..|:..|||.|:....|   .:|   
Zfish   500 STKAMQKHSDIEAPMEADKWPLQATDSVSSADLGLCESSAEETDAQEEYSLKAFIPGDNEEPVHI 564

  Fly   933 --------------------------LARNNSLDDTALQKLAA--AMRYRKR-----DAAVKEE- 963
                                      |..:|.:.|.|...|||  ...||.|     |.|::|| 
Zfish   565 MPSVKGRLIREDEDEAEAGESDSDNILMEDNQVADFASSMLAAISCWHYRARALLSMDFAMEEEG 629

  Fly   964 ----TKTPVKEPCKCDQDAKQDERIEPC----SCILRDQRSRSAKSQSPVFSYKALKERSKSVPR 1020
                ..|..||      :....|:::.|    .||....:|:..|..|...:....||.:...|.
Zfish   630 CAFPENTFKKE------NKPSAEQVKACLKDEKCIFEQDKSQHLKMTSCWGTTDKTKEDTFCDPE 688

  Fly  1021 ---IGGFSLD-EEAEREREQDEDSAASLRGSKPDLSERKTKGKGFFEVKQYNHKT-MPKKIANLK 1080
               :....|| .|.|...:||:     |:|.|.:...||:          :.|:. .|.:  :.:
Zfish   689 PIDVHQHVLDIREMESAIDQDD-----LKGPKKEREARKS----------FLHQNDTPGE--SSE 736

  Fly  1081 KQRSSTTKSCSRFYMDLSEFDSSSS-------TVLKITESTEELRPDG----------------- 1121
            .:..:..|..|...:..|..|.:|:       |..:|:.||::.|..|                 
Zfish   737 DEEDTEEKPGSTSILPSSVLDQASAIAEHFVCTARRISISTDDARSPGCPSPHLPSRTGSTLSLR 801

  Fly  1122 -----------------EIELAQEAA-----TLDESTQDQYYSPDHETELLSPAEKSKRDAQIVL 1164
                             |..|.||..     |:..|.:|..:..|........:..|.:| |:::
Zfish   802 DPLEHQHRLTSTYSDSCESPLTQENLASVDFTIGSSVEDGLFDCDRSICRRRDSVLSTQD-QLLI 865

  Fly  1165 DLLK----NSKEFERIYNKQQKRRES----PVSPVSPDISRGPILPPPRPPSRSPPPLELEEQEK 1221
            ..::    |::..:..::  .|||||    |...|...:||...:|..:..:     ||...:..
Zfish   866 SKIRSYYENAEHQDATFS--LKRRESLSYIPSGLVRNSVSRLNSIPKDKGLA-----LETTVRTF 923

  Fly  1222 KPVEEVDSVSEEPIYETLLRNVHVPYKFSPVLGRAKSSQILKKRSKTAPAAS------------R 1274
            :|.::..| |.:.:::|            ..|..|.||....::.:...:||            :
Zfish   924 EPDKDCAS-SMQSLFDT------------TALSEATSSANSSRQEQPVVSASTNPTGFNVDGSVK 975

  Fly  1275 PESDYVTL------VYSPEGVLQRVGEE-----------------------------VVQRDSCS 1304
            |:|.|:..      |:.|...:.:|.::                             :::||...
Zfish   976 PQSTYIQAESEQNEVFHPSSEMIKVWQDMEREVTRCQGDVKALVPRGNPYFRGICPNLIRRDPNQ 1040

  Fly  1305 SSTTSTSSNGSGSTLKRDSQSTVINLLMEAAQEHESRPLPKNSVSGSESSLLPRALKSIDNLSMA 1369
            ...|....| .|.....||..:.|                      .|.|..|..|...:| |.|
Zfish  1041 DEKTEAKGN-KGLIAFEDSDLSTI----------------------KEESFTPSPLIEKEN-SEA 1081

  Fly  1370 FGRSNRPPERRVSDVSEMCRQSVLHRQGS--EAVGERMAHVDYADPKALFGLGVLNHSERDSV-- 1430
            ..|            ::..||....::|.  .|:..|:..: .|:.:...|.|..:..:.||.  
Zfish  1082 ISR------------NDAIRQKQWQKEGRLLSALAPRVIQL-RAESEYERGTGAQSAEDGDSAQS 1133

  Fly  1431 --------FSLTSSSSDSMCEQQRKRSG-VGATFEYEQQVEDSLENDFR---DS----AIYSDDN 1479
                    :|.....:..|..|:.:.|| .|.|......|.|....:.:   ||    |.|  |.
Zfish  1134 KVLNLARKYSQRIKCTQPMLRQRSQESGETGLTKRNMLSVVDEKPEEVKGKPDSMPSMAPY--DQ 1196

  Fly  1480 EKRSGDYDVHLRRPSSPPPPPPPLGPRPHQPPQIAPKPSK 1519
            ..|..|.:..| .|.||...|.|  |.....|.:....||
Zfish  1197 ADRDRDQEAQL-MPLSPARSPTP--PEKFNWPDVRELRSK 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..713 CDD:279015 78/171 (46%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 52/152 (34%)
plekhg3XP_017208169.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR45924
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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