DRSC/TRiP Functional Genomics Resources

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Protein Alignment GEFmeso and mcf2la

DIOPT Version :10

Sequence 1:NP_788403.2 Gene:GEFmeso / 37134 FlyBaseID:FBgn0050115 Length:1549 Species:Drosophila melanogaster
Sequence 2:XP_073810125.1 Gene:mcf2la / 100148439 ZFINID:ZDB-GENE-090312-122 Length:1242 Species:Danio rerio


Alignment Length:820 Identity:170/820 - (20%)
Similarity:301/820 - (36%) Gaps:255/820 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 EEANKLSAESLDRLTDIKPKFAARLSELARLNNRPLS-----SSSICSTSSSSSSGSDQLLNGKL 511
            ::.:|:..:.|. :.::..|....|.:||....||:.     ..:|..|..||.:..::.:.|.:
Zfish   529 DQVDKVFQKQLS-MQEMFEKRRVSLKKLAAKQTRPVQPVAPRPEAIIKTPVSSPAHREKSIEGDV 592

  Fly   512 MATSYLASVESLAESENELGDQHHPPA------MSVLEKTCL-EIVDSERSFVEDLGQVIKGYLQ 569
            :..:.......|   :|| |...||..      .:||.:..: |::::||::||:|..|::||..
Zfish   593 INGNCKKGELHL---QNE-GSSRHPSVSDEEENFAVLRRHVMNELLETERAYVEELLCVLEGYAA 653

  Fly   570 DWKERACLR------VDELQILFANIEEIYEFNSMLLQRLINTGRD-PGRIARCFIDLRDGFDVY 627
            :....|...      :.:..|||.|:.|||:|:.....|.:....| |..:.:||::......:|
Zfish   654 EMDNPAMSHLIPNTLLHKKDILFGNMSEIYQFHKKTFLRELEAYTDYPELVGQCFLERMTDLQIY 718

  Fly   628 TTYCTSYPEAISLLTKLLQATHTYSLLASTQKLLQHRLPLGSYLLKPVQRILKYHLLLDSLRKH- 691
            ..||.:.|.:.||..:....    :.....||.|:|:|.|.||||||||||.||.|||..|.|: 
Zfish   719 EKYCQNKPRSESLWRQCSDC----AFFQECQKKLEHKLGLDSYLLKPVQRITKYQLLLKELLKYS 779

  Fly   692 --CDVKEVVEAHVIMRQVAHNIDQVKRKQEQQSRVKELSGIL------------DGWLGPELTVL 742
              |:.:|                      :.|..:..:.|||            .|:.| .|:.|
Zfish   780 KGCEGEE----------------------DLQEALSSILGILKAVNDSMHLIAITGYEG-NLSDL 821

  Fly   743 GELRQEG--LLMEQHNK--------------QRLVLLFATMLIITKQKEDG--------RLQFKT 783
            |.|..:|  .:..:|.|              ||.:.|....|:..|::|:.        ...||.
Zfish   822 GRLMMQGSFSVWTEHKKGHAKVKDLARFKPMQRHLFLHEKALLFCKKREENGEGYEKAPSYSFKH 886

  Fly   784 YISQNNLMLSEHLPGEPTSFYVIPFDEPRHQIKLT-ARNRDQKRIWTQHIKGVMLEKLDIPMRAK 847
            .:|.:.:.::|:..|:...|.:  :...|.::.:. |...:.|..|...|:.|:..:|       
Zfish   887 SLSMSAVGITENAKGDNKKFEI--WCNSREEVYIVQASTPEIKTAWVNEIRKVLTRQL------- 942

  Fly   848 ELVYQLGNEEDRTPDRSTWKWSLHSGSNSTPTYLERRNACRRSEIRQRNSKFKRKTVANS----S 908
                                                 .|||.:..::.:.:....|.:::    |
Zfish   943 -------------------------------------KACREASQQKSSDQISPLTPSSTGLTLS 970

  Fly   909 SFDSFNESLEQEEESISQAKPSKPLARNNSLDDTALQKLAAAMRYRKRDAAVKEETKTPVKEPCK 973
            .|.:..:||::.:|..::...:.|               ::|..::..| .:|:||   |..|  
Zfish   971 PFKTNPKSLKKGDEKKTEPTTTDP---------------SSAALFKNND-KLKDET---VVSP-- 1014

  Fly   974 CDQDAKQDERIEPCSCILRDQRSRSAKSQSPVFSYKALKERSKSVPRIGGFSLDEEAEREREQDE 1038
                              ..:|:..||.:..:..:..||.:.:.:...||.||            
Zfish  1015 ------------------NTERAAVAKKRFTLQGFSNLKSQKELLAASGGKSL------------ 1049

  Fly  1039 DSAASL-------RGSKPDLSERKTKGK------GFFEVKQYNHKTMPKKIANLK----KQRSST 1086
                :|       .||.|...:.|||.:      ||.:...:...|..:.::...    |:|..|
Zfish  1050 ----TLPMVTLCHPGSSPPSPDHKTKRQSDPTPFGFRDAGPHITLTRVRWLSTSSLLQTKRRGFT 1110

  Fly  1087 TKSCSRFYMDLSEFDSSSSTVLKITESTEELRPDGEIELAQEAATLDESTQDQYYSP-------D 1144
            ..|.|   ||.||.:...|:      :.:.:..|.|.|..::            .||       |
Zfish  1111 KASLS---MDASEENDGYSS------AEDPMNSDPEDEGGKK------------LSPGKYVVVAD 1154

  Fly  1145 HETELLSPAE---KSKRDAQIVLD---------LLKNSKE 1172
            |:..  .|.|   ||....|:|.:         .|:.|||
Zfish  1155 HDKS--GPQELTVKSGDTVQLVREGDDGRWFVRNLRTSKE 1192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GEFmesoNP_788403.2 RhoGEF 548..712 CDD:459876 54/173 (31%)
PH_PLEKHG1_G2_G3 694..839 CDD:270063 32/181 (18%)
mcf2laXP_073810125.1 None

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