DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgk2 and rasd1

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001072408.1 Gene:rasd1 / 779862 XenbaseID:XB-GENE-483475 Length:266 Species:Xenopus tropicalis


Alignment Length:240 Identity:59/240 - (24%)
Similarity:111/240 - (46%) Gaps:46/240 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   513 PDDSENLDPPPPARYRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDDE 577
            |.::| |:.||...||:|:||.:.||||::|::|::..:...|..::   ::|..|..|:..:..
 Frog     7 PGETE-LNIPPKNCYRMVILGSSKVGKTSIVSRFLSGRFEEQYTPTI---EDFHRKFYSIRGEVY 67

  Fly   578 ESDMVFI--DHPSVEMSVENSLSTYEPHGCVVVFSVVDRSSF----RVAEEII-NYLWQENYTK- 634
            :.|::..  :||...|   ..||.......::|||:.:|.||    |:.::|| .....:|.|| 
 Frog    68 QLDILDTSGNHPFPAM---RRLSILTGDVFILVFSLDNRDSFEEVQRLKQQIIETKSCLKNKTKE 129

  Fly   635 --DKAVILVGNKADLARARLITSQEGKALAASRDAK--FIETSSGIQHNVDELLVGILKQMRLKE 695
              |..:::.|||.|....|.:...|.:.| ...|:|  :.|.|:....::||:...:....:|..
 Frog   130 NVDVPIVICGNKVDRDFYREVQPHEIEQL-VGEDSKCSYFEVSAKKNSSLDEMFKALFTMAKLPS 193

  Fly   696 KREKKATASKMKTSRTHISLHLAKELLQKICLSDISKSKSCENLH 740
            :                    ::.:|.:|:.:      :.||.||
 Frog   194 E--------------------MSPDLHRKVSV------QYCEILH 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 54/226 (24%)
rasd1NP_001072408.1 Rhes_like 20..266 CDD:133343 54/226 (24%)

Return to query results.
Submit another query.