DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and Rgk3

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001286670.1 Gene:Rgk3 / 5740446 FlyBaseID:FBgn0085426 Length:486 Species:Drosophila melanogaster


Alignment Length:512 Identity:148/512 - (28%)
Similarity:226/512 - (44%) Gaps:121/512 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   317 HSTLDRTCSDSVVSLRYRKSTSDLTQDAEHELSGCKPN-KPKAHVEHKPRRRGSSKGGLAYLAS- 379
            |....:|.|.|:.      :|....:...|.:.|...: .|:.......|||.:::...|.:.| 
  Fly    10 HRMQKKTRSASIC------ATGASIETVIHGMPGASGSATPEGGTPGYRRRRPATRSQSARITSG 68

  Fly   380 RRSSRESMK----------------SACSNASIVSNDDVGPLAFQSSNRGRQ----RRTSNFLEL 424
            .||.|:..|                |.|::...:|..:..|...:.|.|..|    |:::.||::
  Fly    69 ARSVRQKTKAQQQQQQQQHTLQETRSYCTSEPRLSETETPPQRRKLSQRRPQTHAHRKSNAFLDV 133

  Fly   425 PVPD--HVRPRVCSLPERPYNPRASDDLYRLRHFSISKGNVVNCGDSIISRRSRSNTSVNST--- 484
            |..:  |:|..           ...:|:.|||.||.|||.::|.|||...||||||:...|:   
  Fly   134 PTMNMHHLRVN-----------DDDEDVDRLRTFSASKGGIINRGDSFRRRRSRSNSLAPSSPMH 187

  Fly   485 --------------NSRASERSPFEGSCCGAGYANVDSLPATPDDSENLDPPPPARYRVVMLGDA 535
                          .|.......:.|.....|:.|.::       .||  ..|...|||.|||.|
  Fly   188 TRNGVGGLGGVAGGGSSLGLGCGYNGGSSSNGFGNANA-------QEN--HQPVEFYRVEMLGSA 243

  Fly   536 GVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDDEESDMVFI-DHPSVEMSVENSLST 599
            ||||.||::||.||:.::.||.. ..||  .|:.||::|:..||::.|: .:|..:..:|     
  Fly   244 GVGKQALLSQFRTSDCINAYDGP-ECDD--AEQNVSIILNGTESELKFLTGNPESKDELE----- 300

  Fly   600 YEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITSQEGKALAAS 664
             :....:||:|.:|:.||..|::|::.|...:..:.:..|||.||.||||:|.:::|:||.:|.:
  Fly   301 -QADAFLVVYSCIDKESFTRAKQILSRLQDMDLLRHRPTILVANKIDLARSRAVSAQDGKCVACT 364

  Fly   665 RDAKFIETSSGIQHNVDELLVGILKQMRLKE---------KREKKATASKMK------------- 707
            ..|||||.|.||.||.||||.|.|.|:|||:         |:.|....:|.|             
  Fly   365 FGAKFIEVSVGINHNCDELLAGTLTQIRLKKDQVQLQLNPKKSKDKDKNKFKENTNIETVETDNC 429

  Fly   708 --------------TSRTH--------ISLHLAKELLQKICLSDISKSKSCENLHVL 742
                          .|..|        ::...|:::|..|...:.||.|.||||.||
  Fly   430 LTDLKADDGGPRDANSPAHWYKSRSVMLASMKARQMLTWILGKEDSKFKHCENLQVL 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 89/259 (34%)
Rgk3NP_001286670.1 P-loop containing Nucleoside Triphosphate Hydrolases 235..>396 CDD:476819 73/169 (43%)

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