DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and Rrad

DIOPT Version :9

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_062636.2 Gene:Rrad / 56437 MGIID:1930943 Length:307 Species:Mus musculus


Alignment Length:368 Identity:109/368 - (29%)
Similarity:160/368 - (43%) Gaps:88/368 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   399 NDDVGPLAFQSSNRGRQRRTSNFLELPVPD-HVRPRVCSLP--ERPYNPRASDDLYRLRHFSISK 460
            |...|....:.:.|.|.||..:....|.|. |.|    |:|  ||        ||    ..:::.
Mouse     4 NGGSGASGSRGAGRERDRRRGSTPWGPAPPLHRR----SMPVDER--------DL----QAALAP 52

  Fly   461 GNVVNCGDSIISRRSRSNTSVNSTNSRASERSPFEGSCCGAGYANVDSLPATPDDSENLDPPPPA 525
            |::.              |:...|.::.......|||.        |||.:....||.      .
Mouse    53 GSLA--------------TTAAGTRTQGQRLDWPEGSS--------DSLSSGGSGSEE------G 89

  Fly   526 RYRVVMLGDAGVGKTALVNQFMTSE-------YMHTYDASLVLDDEFGEKTVSVLLDDEESDMVF 583
            .|:|::||..||||:||...|...|       ..||||.|:.:|   ||:...::.|..|.|.  
Mouse    90 VYKVLLLGAPGVGKSALARIFGGIEDGPEAEAAGHTYDRSITVD---GEEASLLVYDIWEQDG-- 149

  Fly   584 IDHPSVEMSVENSLSTYEPHGC-------VVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILV 641
                          ..:.|..|       |:|:|:.|:.||..|.|:...|.:...|.|..:|||
Mouse   150 --------------GCWLPGHCMAMGDAYVIVYSITDKGSFEKASELRVQLRRARQTDDVPIILV 200

  Fly   642 GNKADLARARLITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKATASKM 706
            |||:||.|:|.::..||:|.|...|.||||||:.:.|||..|..|:::|:||: :..|:..|.:.
Mouse   201 GNKSDLVRSREVSVDEGRACAVVFDCKFIETSAALHHNVQALFEGVVRQIRLR-RDSKEDNARRQ 264

  Fly   707 KTSRTHISL-HLAKELLQKIC------LSDISKSKSCENLHVL 742
            ..:|...|| ..||..|.:|.      ::..:|||||.:|.||
Mouse   265 AGTRRRESLGKKAKRFLGRIVARNSRKMAFRAKSKSCHDLSVL 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 80/235 (34%)
small_GTPase 527..694 CDD:197466 64/180 (36%)
RradNP_062636.2 RGK 91..307 CDD:206715 80/235 (34%)
Calmodulin-binding. /evidence=ECO:0000250 277..296 4/18 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D301527at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8675
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45775
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5084
SonicParanoid 1 1.000 - - X743
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.910

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