Protein Alignment Rgk2 and gem

DIOPT Version :9

• Sequence 1: NP_001286577.1
• Gene: Rgk2 / 37132
• FlyBaseID: FBgn0085419
• Length: 742
• Species: Drosophila melanogaster
• Sequence 2: NP_001039314.1
• Gene: gem / 560566
• ZFINID: ZDB-GENE-060825-251
• Length: 291
• Species: Danio rerio
• Alignment Length: 324
• Identity: 99/324 - (30%)
• Similarity: 152/324 - (46%)
• Gaps: 67/324 - (20%)

  Fly   440 RPYNPRASDDLYRLRHFSISKGNVVNCGDSIISRRSRSNTSVNSTNSRASERSPFEGSCCGAGYA 504
            |.::.|....|:|........|.::|  |:.    .||:.|::.::|.:|              |
Zfish     8 RRHSIRVQHHLHRWSICGTDGGQLLN--DAF----PRSDISMSRSSSCSS--------------A 52

  Fly   505 NVDSLPATPDDSENLDPPPPARYRVVMLGDAGVGKTALVNQF------MTSEYM----HTYDASL 559
            :.||..:|    |:..|.....:.||:|||.||||:||.:.|      |.||..    ..::.::
Zfish    53 SSDSALST----ESATPASVGPFTVVLLGDNGVGKSALASIFAGASDSMGSECELYGGEIFEQTI 113

  Fly   560 VLDDEFGEKTVSVLLDDEESDMVFIDHPSVEMSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEII 624
            .:|   ||:....|||..:|.    |..|  .:.:..|.|.:  ..::|:::.|||||..|.::.
Zfish   114 TVD---GERASVTLLDTWDSQ----DEGS--WTQQRCLQTGD--AFIIVYAITDRSSFLRASDLR 167

  Fly   625 NYLWQENYTKDKAVILVGNKADLARARLITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILK 689
            ..|.:|.......:||||||.||.|.|.::..||::.||..|.||||||:.:||||..|..||::
Zfish   168 VQLRREREVDRTPIILVGNKCDLVRCREVSISEGRSSAAVFDCKFIETSAAMQHNVWPLFEGIIR 232

  Fly   690 QMRLKEKREKKATASKMKTSRTHISLHLAKELLQKICLSDIS--------------KSKSCENL 739
            |:||:.        ..|:|..:|.||...:|.|.|.....|:              |||||.:|
Zfish   233 QLRLRR--------DSMETLSSHSSLQKRRESLPKKAKRFINRMVAKKNKQAAFKLKSKSCHDL 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rgk2	NP_001286577.1	RGK	527..742	CDD:206715	81/237 (34%)
		small_GTPase	527..694	CDD:197466	65/176 (37%)
gem	NP_001039314.1	RGK	71..291	CDD:206715	81/237 (34%)
		small_GTPase	73..237	CDD:197466	65/174 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0395
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D301527at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR45775
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	5	4.880