DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and sike1

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_012816903.1 Gene:sike1 / 496965 XenbaseID:XB-GENE-1003385 Length:260 Species:Xenopus tropicalis


Alignment Length:267 Identity:48/267 - (17%)
Similarity:87/267 - (32%) Gaps:81/267 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   494 FEGSCCGAGYANVDSLPATPDDSENLDPPPPARYRVVMLGDAGVGKTALVNQFMTSEYMHTYDAS 558
            |:..|..||:.    |..|..|.:...|         :...:.|..|..:::.:       .||.
 Frog    22 FKIVCMFAGHL----LDFTSQDPQLQQP---------VFYISSVAMTCTIDKIL-------QDAK 66

  Fly   559 LVLDDEFGEKTVSVLLDDEESDMVFIDHPSVEMSVE----------------NSLSTYEPHGCVV 607
            .:|:........:..|.|:.|.:    |..||...|                ...|..:||    
 Frog    67 TLLERLKDHDNAAESLIDQSSAL----HKRVEAMKEVGTAMPEKYQEELADIKDASKLKPH---- 123

  Fly   608 VFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITSQE----------GKALA 662
            |....:.:..|..::....||........|:.|:.:|......:|:.:::          .|..:
 Frog   124 VLLCQENTQIRDLQQENKELWVSLEEHQYALELIMSKYRKQMLQLVANKKPAPTEPVLEAHKTFS 188

  Fly   663 AS---------------RDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKATASKMKTSRTH 712
            :.               |||  |:......:|:.|.|..:  ::..||.||..:|:.:       
 Frog   189 SDLECQIDRICVMGDIMRDA--IQLDEDKAYNIQEKLAQL--ELENKELREILSTSKE------- 242

  Fly   713 ISLHLAK 719
             |||.:|
 Frog   243 -SLHSSK 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 40/234 (17%)
sike1XP_012816903.1 SIKE 55..240 CDD:461735 34/203 (17%)

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