DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and rap1b

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001008195.1 Gene:rap1b / 493557 XenbaseID:XB-GENE-479036 Length:184 Species:Xenopus tropicalis


Alignment Length:182 Identity:53/182 - (29%)
Similarity:97/182 - (53%) Gaps:11/182 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 YRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDDEESDMVFIDHPSVE- 590
            |::|:||..||||:||..||:...::..||.:  ::|.: .|.|.|  |.::..:..:|....| 
 Frog     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPT--IEDSY-RKQVEV--DGQQCMLEILDTAGTEQ 63

  Fly   591 MSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITS 655
            .:....|......|..:|:|:..:|:|...:::...:.:...|.|..:||||||.||...|::..
 Frog    64 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGK 128

  Fly   656 QEGKALAAS-RDAKFIETSSGIQHNVDELLVGILKQMRLKE----KREKKAT 702
            ::|:.||.. .:..|:|:|:..:.||:|:...:::|:..|.    |..||:|
 Frog   129 EQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKST 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 53/182 (29%)
rap1bNP_001008195.1 Rap1 3..167 CDD:133375 48/167 (29%)
Effector region. /evidence=ECO:0000305 32..40 3/9 (33%)

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