DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgk2 and krasl

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001008034.1 Gene:krasl / 493396 XenbaseID:XB-GENE-6036229 Length:186 Species:Xenopus tropicalis


Alignment Length:190 Identity:54/190 - (28%)
Similarity:104/190 - (54%) Gaps:19/190 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 YRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDDEESDMVFIDHPSVE- 590
            |::|::|..||||:||..|.:.:.::..||.:  ::|.:.::   |::|.|...:..:|....| 
 Frog     4 YKLVVVGAGGVGKSALTIQLIQNHFVDEYDPT--IEDSYRKQ---VVIDGETCLLDILDTAGQEE 63

  Fly   591 --MSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDK---AVILVGNKADLARA 650
              ...:..:.|.|  |.:.||::.:..||   |::.:|..|.|..||.   .::|||||.||. :
 Frog    64 YSAMRDQYMRTGE--GFLCVFAINNTKSF---EDVHHYREQINRVKDSDDVPMVLVGNKCDLP-S 122

  Fly   651 RLITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKATASKMKTSR 710
            |.:.:::.:.||.|....|||||:..:..|::....:::::|  :.:||.:...|.|:|:
 Frog   123 RTVDTKQAQELAKSYGIPFIETSAKTRQGVEDAFYTLVREIR--KHKEKISNGKKKKSSK 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 54/190 (28%)
kraslNP_001008034.1 H_N_K_Ras_like 3..164 CDD:133338 48/170 (28%)

Return to query results.
Submit another query.