DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and rasd1

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_956826.1 Gene:rasd1 / 393504 ZFINID:ZDB-GENE-040426-1473 Length:265 Species:Danio rerio


Alignment Length:241 Identity:60/241 - (24%)
Similarity:109/241 - (45%) Gaps:36/241 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   512 TPDDSENLDPPPPARYRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDD 576
            :|.::| .|.|....||:|:||...|||||:|::|:...:...|..::   ::|..|..|:..|.
Zfish     6 SPSENE-FDIPAKNCYRMVILGSTKVGKTAIVSRFLNGRFEEQYTPTI---EDFHRKLYSIKGDV 66

  Fly   577 EESDMVFI--DHPSVEMSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQ-----ENYTK 634
            .:.|::..  :||...|   ..||.......::|||:.:|.||...:.:...:::     :|.||
Zfish    67 YQLDILDTSGNHPFPAM---RRLSILTGDVFILVFSLDNRESFHEVQRLKQQIYETKSCLKNKTK 128

  Fly   635 ---DKAVILVGNKADLARARLITSQE-GKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKE 695
               |..:::.|||.|....|.:...| .:.:|......:.|.|:....|||::.           
Zfish   129 ENVDVPLVICGNKGDREFYREVQRDEIEQLIAGDEQCAYFEISAKRNTNVDQMF----------- 182

  Fly   696 KREKKATASKMKTSRTHISLHLAKELLQKICLSDISKSKSCENLHV 741
              ::..|.:|:.   ..:|..|.:::..:.|  ||...||.:|..|
Zfish   183 --QRLFTLAKLP---NEMSPDLHRKVSVQYC--DILHKKSLKNKKV 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 56/226 (25%)
rasd1NP_956826.1 Rhes_like 20..265 CDD:133343 56/226 (25%)

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