DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and rrad

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_021333082.1 Gene:rrad / 327396 ZFINID:ZDB-GENE-030131-5607 Length:304 Species:Danio rerio


Alignment Length:351 Identity:105/351 - (29%)
Similarity:161/351 - (45%) Gaps:87/351 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   415 QRRTSNFLELPVPDHVRP---RVCSLPERPYN--PRAS-DDLYRLRHFSISKGNVV-NCGDSIIS 472
            :||.|    :|.|.|::.   |...:.:|...  |.|. .:|..|..|:..:.:.| :..||:||
Zfish    18 KRRGS----MPFPLHLQTLHRRSMPVDDRELRSMPAAQPSELPGLMRFNADRNSCVSDSSDSVIS 78

  Fly   473 RRSRSNTSVNSTNSRASERSPFEGSCCGAGYANVDSLPATPDDSENLDPPPPARYRVVMLGDAGV 537
            ..|.|:..|                                             |:||:||:.||
Zfish    79 SGSDSDGQV---------------------------------------------YKVVLLGEHGV 98

  Fly   538 GKTALVNQF-------MTSEYMHTYDASLVLDDEFGEKTVSVLLDD--EESDMVFIDHPSVEMSV 593
            ||::|...|       ...|..:|||.|||:|||    ..|:||.|  |:.:..::....:.|. 
Zfish    99 GKSSLARIFGGVEDSNDCEETGNTYDRSLVVDDE----ETSILLYDIWEQDNSQWLQDQCMRMG- 158

  Fly   594 ENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITSQEG 658
                ..|     ::|:||.|:|||..|.|:...|.:...:::..:||||||:||.|:|.::..||
Zfish   159 ----DAY-----IIVYSVTDKSSFEKASELRIQLRRARQSENIPIILVGNKSDLVRSREVSMDEG 214

  Fly   659 KALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKATASKMKTSRTHISL-HLAKELL 722
            .|.|...|.||||||:.:.|||.:|..||::|:||: |..|:..|.:|...:...|: ..||..|
Zfish   215 SACAVVFDCKFIETSASLHHNVRDLFEGIVRQIRLR-KDSKEENARRMANCKRRESISKKAKRFL 278

  Fly   723 QKIC------LSDISKSKSCENLHVL 742
            .::.      ::...|||||.:|.||
Zfish   279 GRMVARKNKKMAFRQKSKSCHDLSVL 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 82/230 (36%)
rradXP_021333082.1 RGK 88..304 CDD:206715 82/230 (36%)

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