DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rgk2 and Rap1b

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_077777.1 Gene:Rap1b / 215449 MGIID:894315 Length:184 Species:Mus musculus


Alignment Length:182 Identity:52/182 - (28%)
Similarity:97/182 - (53%) Gaps:11/182 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 YRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDDEESDMVFIDHPSVE- 590
            |::|:||..||||:||..||:...::..||.:  ::|.: .|.|.|  |.::..:..:|....| 
Mouse     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPT--IEDSY-RKQVEV--DAQQCMLEILDTAGTEQ 63

  Fly   591 MSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITS 655
            .:....|......|..:|:|:..:|:|...:::...:.:...|.|..:||||||.||...|::..
Mouse    64 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTDDVPMILVGNKCDLEDERVVGK 128

  Fly   656 QEGKALAAS-RDAKFIETSSGIQHNVDELLVGILKQMRLKE----KREKKAT 702
            ::|:.||.. .:..|:|:|:..:.||:|:...:::|:..|.    |..||::
Mouse   129 EQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQINRKTPVPGKARKKSS 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 52/182 (29%)
Rap1bNP_077777.1 Rap1 3..167 CDD:133375 48/167 (29%)
Interaction with KRIT1. /evidence=ECO:0000250|UniProtKB:P61224 25..67 9/46 (20%)
Effector region. /evidence=ECO:0000305 32..40 3/9 (33%)

Return to query results.
Submit another query.