DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and Rem1

DIOPT Version :9

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_033073.1 Gene:Rem1 / 19700 MGIID:1097696 Length:297 Species:Mus musculus


Alignment Length:349 Identity:110/349 - (31%)
Similarity:157/349 - (44%) Gaps:72/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   408 QSSNRGRQRRTSNFLELPVPDHVRPRVCSLPERPYNPRASDDLYRLRHFSISKGNVVNCGDSIIS 472
            |.:....:||.|..|.|....|...|:|:.|..|                              |
Mouse     7 QEAKTTLRRRASTPLPLSSRGHQPGRLCTAPSAP------------------------------S 41

  Fly   473 RRSRSNTSVNSTNSRASERSPFEGSCCGAGYANVDSLPATPDDSENLDPPPPARYRVVMLGDAGV 537
            :..|...|| |.|....:.||.:           |...:...|||.   ...|.||||:|||.||
Mouse    42 QHPRLGQSV-SLNPPVRKPSPAQ-----------DGWSSESSDSEG---SWEALYRVVLLGDPGV 91

  Fly   538 GKTALVNQFMTSEYMH-------TYDASLVLDDEFGEKTVSVLLDDEESDMVFIDHPSVEMSVEN 595
            |||:|.:.|...:...       .|:.:|.:|   ||.|..|::|..|::.  :|....:.|...
Mouse    92 GKTSLASLFAEKQDRDPHEQLGGVYERTLSVD---GEDTTLVVMDTWEAEK--LDESWCQESCLQ 151

  Fly   596 SLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITSQEGKA 660
            :.|.|     |:|:|:.|||||..|.|:...|.:.:......:|||||||||||.|.::.:||:|
Mouse   152 AGSAY-----VIVYSIADRSSFESASELRIQLRRTHQANHVPIILVGNKADLARCREVSVEEGRA 211

  Fly   661 LAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKATASKMKTSRTHISL-HLAKELLQK 724
            .|...|.||||||:.:||||.||..|:::|:||   |.:...|.:..:.|...|| ..|:..|.:
Mouse   212 CAVVFDCKFIETSATLQHNVTELFEGVVRQLRL---RRQDNAAPETPSPRRRASLGQRARRFLAR 273

  Fly   725 ICLSDI------SKSKSCENLHVL 742
            :.....      ::||||.||.||
Mouse   274 LTARSARRRALKARSKSCHNLAVL 297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 84/228 (37%)
small_GTPase 527..694 CDD:197466 70/173 (40%)
Rem1NP_033073.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..73 20/107 (19%)
RGK 81..297 CDD:206715 84/228 (37%)
small_GTPase 81..245 CDD:197466 71/176 (40%)
Calmodulin-binding 267..286 2/18 (11%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H7514
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S12199
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8675
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45775
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5084
SonicParanoid 1 1.000 - - X743
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
98.850

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