DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and drn-1

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_001333544.2 Gene:drn-1 / 183765 WormBaseID:WBGene00016911 Length:219 Species:Caenorhabditis elegans


Alignment Length:185 Identity:49/185 - (26%)
Similarity:90/185 - (48%) Gaps:22/185 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 YRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEF------GEKTVSVL-LDDEESDMVFI 584
            |||.:.|..||||:::..:|:...:...|..:  ::|.:      .:|.|..| :.|......| 
 Worm    31 YRVAVFGAGGVGKSSITQRFVKGTFNENYVPT--IEDTYRQVISCNQKNVCTLQITDTTGSHQF- 92

  Fly   585 DHPSVEMSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQ--ENYTKDKAVILVGNKADL 647
              |:::     .||..:.:..::::||.::.||.....||..:.:  .|...:..::|||||.|.
 Worm    93 --PAMQ-----RLSISKGNAFILIYSVTNKQSFAELVPIIEMMKEVKGNAIAETPIMLVGNKKDE 150

  Fly   648 ARARLITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKAT 702
            ...|.::|..|:.:|.:.:..|||||:....|:.||...:|   .|::||:...|
 Worm   151 ESKREVSSNSGQKVATNMECGFIETSAKNNENITELFQQLL---ALEKKRQLALT 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 49/185 (26%)
drn-1NP_001333544.2 P-loop containing Nucleoside Triphosphate Hydrolases 30..195 CDD:476819 46/176 (26%)

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