DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and REM2

DIOPT Version :9

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:XP_016876547.1 Gene:REM2 / 161253 HGNCID:20248 Length:373 Species:Homo sapiens


Alignment Length:516 Identity:123/516 - (23%)
Similarity:186/516 - (36%) Gaps:208/516 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 QEAGQPQLRRQRRHAINITSN--------------PGYQVLH-------------SSHSTLDRTC 324
            |.:|...:|.|.||:..:..|              ||..:||             .||..|:   
Human     6 QASGDFSVRGQARHSQFLLGNGHQVGVAGPLILEQPGLSLLHMVEHIPLIASFSLPSHFILE--- 67

  Fly   325 SDSVVSLRYRKSTSDLTQDAEHELSGCKPNKPKAHVEHKPRRRGSSKGGLAYLASRRSSRESMKS 389
            :|:.:   .:||...|   ||.:.||. |:.|.|     ||||||                    
Human    68 ADATL---LKKSEKLL---AELDRSGL-PSAPGA-----PRRRGS-------------------- 100

  Fly   390 ACSNASIVSNDDVGPLAFQSSNRGRQRRTSNFLELPVP-DHVRPRVCSLPERPYNPRASDDLYRL 453
                                              :||| .|...|..::.|..:.|:||      
Human   101 ----------------------------------MPVPYKHQLRRAQAVDELDWPPQAS------ 125

  Fly   454 RHFSISKGNVVNCGDSIISRRSRSNTSVNSTNSRASERSPFEGSCCGAGYANVDSLPATPDDSEN 518
                 |.|:    .||:                             |:|    ::.||..|    
Human   126 -----SSGS----SDSL-----------------------------GSG----EAAPAQKD---- 144

  Fly   519 LDPPPPARYRVVMLGDAGVGKTALVNQF--MTSEYMH--------TYDASLVLDDEFGEKTVSVL 573
                  ..::|:::|::||||:.|...|  :..:..|        ||:..:::|.|  |.|:.|.
Human   145 ------GIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPAEDTYERRIMVDKE--EVTLVVY 201

  Fly   574 LDDEESDM--VFIDHPSVEMSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDK 636
            ...|:.|.  ...||         .|.|.:  ..::||||.||.||....|.:..|.......|.
Human   202 DIWEQGDAGGWLRDH---------CLQTGD--AFLIVFSVTDRRSFSKVPETLLRLRAGRPHHDL 255

  Fly   637 AVILVGNKADLARARLITSQEGKALAASRDAKFIETSSGIQHNVDELLVGILKQMRLKEKR---- 697
            .|||||||:||||:|.::.:||:.||.:...|.||||:.:.||..||..|.::|:||:..|    
Human   256 PVILVGNKSDLARSREVSLEEGRHLAGTLSCKHIETSAALHHNTRELFEGAVRQIRLRRGRNHAG 320

  Fly   698 ----------------EKKATASKMKTSRTHISLHLAKELLQKICLSDISKSKSCENLHVL 742
                            .:::...|.|....::....||...|        :|:||.:|.||
Human   321 GQRPDPGSPEGPAPPARRESLTKKAKRFLANLVPRNAKFFKQ--------RSRSCHDLSVL 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 72/246 (29%)
small_GTPase 527..694 CDD:197466 61/178 (34%)
REM2XP_016876547.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0395
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D301527at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45775
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X743
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
76.880

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