DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rgk2 and Rap1a

DIOPT Version :10

Sequence 1:NP_001286577.1 Gene:Rgk2 / 37132 FlyBaseID:FBgn0085419 Length:742 Species:Drosophila melanogaster
Sequence 2:NP_663516.1 Gene:Rap1a / 109905 MGIID:97852 Length:184 Species:Mus musculus


Alignment Length:181 Identity:53/181 - (29%)
Similarity:97/181 - (53%) Gaps:7/181 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   527 YRVVMLGDAGVGKTALVNQFMTSEYMHTYDASLVLDDEFGEKTVSVLLDDEESDMVFIDHPSVE- 590
            |::|:||..||||:||..||:...::..||.:  ::|.: .|.|.|  |.::..:..:|....| 
Mouse     4 YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPT--IEDSY-RKQVEV--DCQQCMLEILDTAGTEQ 63

  Fly   591 MSVENSLSTYEPHGCVVVFSVVDRSSFRVAEEIINYLWQENYTKDKAVILVGNKADLARARLITS 655
            .:....|......|..:|:|:..:|:|...:::...:.:...|:|..:||||||.||...|::..
Mouse    64 FTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQILRVKDTEDVPMILVGNKCDLEDERVVGK 128

  Fly   656 QEGKALAAS-RDAKFIETSSGIQHNVDELLVGILKQMRLKEKREKKATASK 705
            ::|:.||.. .:..|:|:|:..:.||:|:...:::|:..|...|||....|
Mouse   129 EQGQNLARQWCNCAFLESSAKSKINVNEIFYDLVRQINRKTPVEKKKPKKK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rgk2NP_001286577.1 RGK 527..742 CDD:206715 53/181 (29%)
Rap1aNP_663516.1 Rap1 3..167 CDD:133375 48/167 (29%)
Effector region. /evidence=ECO:0000305 32..40 3/9 (33%)

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