DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pepck1 and pck-3

DIOPT Version :10

Sequence 1:NP_523784.2 Gene:Pepck1 / 37131 FlyBaseID:FBgn0003067 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_500887.1 Gene:pck-3 / 177360 WormBaseID:WBGene00019151 Length:624 Species:Caenorhabditis elegans


Alignment Length:673 Identity:164/673 - (24%)
Similarity:279/673 - (41%) Gaps:131/673 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 RQDNCGLYSHIRGIPISYGNVDLLTTGVRAFVEEGIALCQPDQVHICDGS--------------- 74
            ||.|..:..:...:|:..|::..|:..|..|:.:.:.|..|..|.||:||               
 Worm    30 RQHNTLIVPNFGQVPVLKGDLTWLSPEVLTFLNDCVQLMTPCAVRICNGSVFEAQELRDAIANEF 94

  Fly    75 -EQENKVLIKSLLEAGTIVPLPKYDNCWLARTNPADVARVESRTFICTERREETIPTPVEGVKGT 138
             .:|.::|.:..|:...|    .||:..:...:..|.....|.:.....|...:  ...||::..
 Worm    95 GNEEQQMLDRFHLKMADI----GYDDVSVVTKDRLDADPGISLSNASASRTSSS--GSGEGIENV 153

  Fly   139 --LGNWISPSDMDAAVQQRFPGCMKGRTMYVVPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTR 201
              ..:::|....|....:.|...|.||||||||||||.:||..:.:|:::||...:|.::|...|
 Worm   154 RLSSHYMSQKMFDFNKTKLFDCSMSGRTMYVVPFSMGTIGSRRAVVGVQITDDPVLVLNLRTTFR 218

  Fly   202 MGAAVLRQLAKKEEFVRALHSVGAPAN--GQVEQPSWPCDPERTIILHKPAENLIVSYGSGYGGN 264
            :.:.:...:|....|:|.:|::|.|..  .::..||....|..:.::.|..:..:.::|..:|..
 Worm   219 VLSNIWDHIAATTNFLRCVHTIGMPRPIIRKIVTPSPVETPVGSFLVLKHDDQEVWAHGHSFGRT 283

  Fly   265 SLLGKKCFALRIGSTIAKQEGWLAEHMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSLA-N 328
            ...| |.|::...|.:..::|||||...||.||:||.:..::..   |:....:...|:..|| .
 Worm   284 PRYG-KTFSVHAASWLGAKQGWLAESAAILAITNPKNDTIHVCY---SSLTTIDSLQLSKGLAPG 344

  Fly   329 YKVECVGDDIAWMKFDSQGVLRAINPENGFFGVAPGTSMET--NPIAMNTVFKNTIFTNVASTSD 391
            :||..|.:...|:.: ..|.:...:|||        ..||.  :|       ||  ..|:.:   
 Worm   345 WKVTVVSEKSVWLHW-HDGKIYGFSPEN--------DEMEELGSP-------KN--LANLLT--- 388

  Fly   392 GGVFWEGMESSLAPNVQITDWLGKPWTKDSGKPAAHPNSRFCTPAAQCPIIDEAWEDPAGVPISA 456
             ||..|....|..|..          ||                          |....||||||
 Worm   389 -GVISEYQIQSFDPQS----------TK--------------------------WASDVGVPISA 416

  Fly   457 MLFGGRRPAGVPLIYEARDWTHGVFIGAAMR---------SEATAAAEHKG----KVIMHDPFAM 508
            ::|..||....|||.||..|..||.:.|.:|         ||.:.....:|    ::::..|...
 Worm   417 LIFANRRHDQYPLILEANTWEEGVCVAAGIRVSSMKQQKISEESVKESVEGASPRRILVECPMLR 481

  Fly   509 RPFFGYNFGDYVAHWLSME----------KRGQVPKIFHVNWFRKSAEGKFMWPGYGENSRVLEW 563
            .....::...||.|||.|.          :....|:||..|.::: .:||.:|||..:|:|:.|:
 Worm   482 ADAINFSIAKYVKHWLEMGVGVKSSSENFENPPPPQIFFTNLYQE-VDGKPLWPGGVDNARIFEY 545

  Fly   564 ILRRVNGE---SCYVDSAIGHIP----AEGALNLDGMKDKVDVKEIFSLPKEFWSQEVKDIRTYF 621
            |..|....   |..:.|.:|.:|    .....||..:. :||::        ||..|:..:|.:|
 Worm   546 IYERCANPADLSKTISSGLGIVPKTLQLSAGTNLAPLL-QVDIR--------FWLTELNKLRAFF 601

  Fly   622 ESQVGADLPASIYQQLDELSSRV 644
            ..|:...||..:.:.|.:|::.:
 Worm   602 NLQMECSLPPQLDKVLTDLAANL 624

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pepck1NP_523784.2 PEPCK_GTP 52..640 CDD:238417 157/640 (25%)
pck-3NP_500887.1 PEPCK_HprK 57..620 CDD:473983 157/640 (25%)

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