DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pepck1 and pck-1

DIOPT Version :9

Sequence 1:NP_523784.2 Gene:Pepck1 / 37131 FlyBaseID:FBgn0003067 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_497134.1 Gene:pck-1 / 175171 WormBaseID:WBGene00021043 Length:651 Species:Caenorhabditis elegans


Alignment Length:643 Identity:340/643 - (52%)
Similarity:444/643 - (69%) Gaps:33/643 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 HKLRQDNCGLYSHIRGIPISYGNVDLLTTGVRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLL 86
            |||..           |||..|:...|:..|:.||.|...|..|..::|||||::|...::..|:
 Worm    25 HKLNH-----------IPIFKGDFASLSPKVQRFVAEKAELMNPAGIYICDGSQKEYDDIVDKLV 78

  Fly    87 EAGTIVPLPKYDNCWLARTNPADVARVESRTFICTERREETIPTPVEGVKGTLGNWISPSDMDAA 151
            |.|.:.||..|:|.:|.||:|.|||||||:|::.|:.:.:::....:||:..:|.|:|.......
 Worm    79 ERGVLTPLKAYENNYLCRTDPRDVARVESKTWMVTKDKYDSVCHTPDGVRPIMGQWMSEEQFGVE 143

  Fly   152 VQQRFPGCMKGRTMYVVPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEF 216
            :..||||||.||.|||||:||||:|.||||.|||||||.|||..||.|||||..||..|. ..:|
 Worm   144 LDSRFPGCMAGRPMYVVPYSMGPIGGPLSKNGIELTDSPYVVLCMRTMTRMGTKVLEALG-DNDF 207

  Fly   217 VRALHSVGAPANGQVEQP---SWPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGS 278
            ||.:||||.|.  .|:|.   .|||:||:.:|.|:|.|..|.|:||||||||:||||||||||..
 Worm   208 VRCIHSVGLPR--PVKQKVINHWPCNPEKVMIAHRPKEREIWSFGSGYGGNSILGKKCFALRIAC 270

  Fly   279 TIAKQEGWLAEHMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKF 343
            .|.:.||||||||||:|:|:|:||:|:|.|||||||||||||||.|::..:||..||||||||||
 Worm   271 NIGRDEGWLAEHMLIMGVTNPEGEEKFIAAAFPSACGKTNLAMLTPTVPGWKVRVVGDDIAWMKF 335

  Fly   344 DSQGVLRAINPENGFFGVAPGTSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSL----- 403
            .:.|.|.|||||.||||||||||.:||.:||.:...||||||||.|:||..||||:|..|     
 Worm   336 GADGRLYAINPEAGFFGVAPGTSHKTNAMAMESCRANTIFTNVAETADGEYFWEGLEKELKEAKG 400

  Fly   404 -----APNVQITDWLGKPW-TKDSGKPAAHPNSRFCTPAAQCPIIDEAWEDPAGVPISAMLFGGR 462
                 ..:::||:|||:.| ..|.|| ||||||||..||.|||.|...||.|.||||.|::||||
 Worm   401 YTDEQLKHLEITNWLGERWHIGDEGK-AAHPNSRFTAPAKQCPNIHPDWEAPQGVPIDAIVFGGR 464

  Fly   463 RPAGVPLIYEARDWTHGVFIGAAMRSEATAAAEHKGKVIMHDPFAMRPFFGYNFGDYVAHWLSME 527
            ||.||||::|:..|.||:.:||.::||.|||||..||.:||||.|||||.|||:|.|:.||:.:.
 Worm   465 RPEGVPLVFESFSWEHGILVGALVKSETTAAAEFTGKNVMHDPMAMRPFMGYNYGKYLEHWIKLG 529

  Fly   528 KR-GQVPKIFHVNWFRKSAEGKFMWPGYGENSRVLEWILRRVNG--ESCYVDSAIGHIPAEGALN 589
            |. .:.||||||||||::.:.||:|||:|:|.|||:||||||.|  |...:::|||::|..|.:|
 Worm   530 KAPHKAPKIFHVNWFRETKDHKFLWPGFGDNIRVLDWILRRVAGGEEEIAIETAIGYVPKRGTIN 594

  Fly   590 LDGMKDKVDVKEIFSLPKEFWSQEVKDIRTYFESQVGADLPASIYQQLDELSSRVDNL 647
            |||: .::|..::.|:||::|.::|.:.|.:.::|||:|||..|..:||:|..||..|
 Worm   595 LDGL-PRIDWNDLMSIPKDYWVEDVDESRHFLDTQVGSDLPQPIRDELDKLEKRVHAL 651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pepck1NP_523784.2 PEPCK 54..644 CDD:279197 328/606 (54%)
pck-1NP_497134.1 PEPCK_GTP 44..644 CDD:238417 328/604 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167288
Domainoid 1 1.000 466 1.000 Domainoid score I223
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3356
Inparanoid 1 1.050 713 1.000 Inparanoid score I333
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61114
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002991
OrthoInspector 1 1.000 - - mtm4840
orthoMCL 1 0.900 - - OOG6_102518
Panther 1 1.100 - - O PTHR11561
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1986
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1211.900

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