DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pepck1 and pck-2

DIOPT Version :9

Sequence 1:NP_523784.2 Gene:Pepck1 / 37131 FlyBaseID:FBgn0003067 Length:647 Species:Drosophila melanogaster
Sequence 2:NP_001366912.1 Gene:pck-2 / 172556 WormBaseID:WBGene00011232 Length:654 Species:Caenorhabditis elegans


Alignment Length:618 Identity:345/618 - (55%)
Similarity:443/618 - (71%) Gaps:14/618 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 IPISYGNVDLLTTGVRAFVEEGIALCQPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWL 102
            :||..|:..||...|:.|:.|...|.:|..:.|||||:.|...||..|:|.|.:..|..|:|.::
 Worm    43 VPILKGDFHLLPAKVQRFIAEKAELMRPRGIFICDGSQHEADELIDKLIERGMLSKLEAYENNYI 107

  Fly   103 ARTNPADVARVESRTFICTERREETIPTPVEGVKGTLGNWISPSDMDAAVQQRFPGCMKGRTMYV 167
            .||:|.|||||||:|::.|:.:.:|:....|||:..:|:|::|.|:...:..||||||.||.|||
 Worm   108 CRTDPKDVARVESKTWMVTKNKYDTVTHTKEGVEPIMGHWLAPEDLATELDSRFPGCMAGRIMYV 172

  Fly   168 VPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVGAPANGQVE 232
            :||||||||.|||||||:||||.|||.|||||||:...|...|. .::|||.:||||.|.  .|:
 Worm   173 IPFSMGPVGGPLSKIGIQLTDSNYVVLSMRIMTRVNNDVWDALG-NQDFVRCIHSVGLPR--PVK 234

  Fly   233 Q---PSWPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQEGWLAEHMLIL 294
            |   ..|||:|||.:|.|:|.|..|.|:|||||||||||||||||||.|.|||.|||:||||||:
 Worm   235 QRVINHWPCNPERVLIAHRPPEREIWSFGSGYGGNSLLGKKCFALRIASNIAKDEGWMAEHMLIM 299

  Fly   295 GITDPKGEKKYITAAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKFDSQGVLRAINPENGFF 359
            |:|.|.|.:.:|.|||||||||||||||.|:|..:||.|||||||||||...|.|.|||||.|||
 Worm   300 GVTRPCGREHFIAAAFPSACGKTNLAMLEPTLPGWKVRCVGDDIAWMKFGEDGRLYAINPEAGFF 364

  Fly   360 GVAPGTSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSLA-PNVQITDWLGKPWTKDSGK 423
            |||||||.:|||:|:.|..||:||||||.|::|..||||:|..:| .||.||.|||:.|  ..|:
 Worm   365 GVAPGTSNKTNPMAVATFQKNSIFTNVAETANGEYFWEGLEDEIADKNVDITTWLGEKW--HIGE 427

  Fly   424 P--AAHPNSRFCTPAAQCPIIDEAWEDPAGVPISAMLFGGRRPAGVPLIYEARDWTHGVFIGAAM 486
            |  ||||||||..||.|||||...||.|.||||.|::||||||.|||||||...|.||||.|:.:
 Worm   428 PGVAAHPNSRFAAPANQCPIIHPDWESPQGVPIEAIIFGGRRPQGVPLIYETNSWEHGVFTGSCL 492

  Fly   487 RSEATAAAEHKGKVIMHDPFAMRPFFGYNFGDYVAHWLSMEKRG-QVPKIFHVNWFRKSAEGKFM 550
            :||||||||..||.:||||.|||||.|||||.|:.|||.::... ::|||:|||||||.:..||:
 Worm   493 KSEATAAAEFTGKTVMHDPMAMRPFMGYNFGKYLQHWLDLKTDSRKMPKIYHVNWFRKDSNNKFL 557

  Fly   551 WPGYGENSRVLEWILRRVNGE-SCYVDSAIGHIPAEGALNLDGMKDKVDVKEIFSLPKEFWSQEV 614
            |||:|:|.||::||:||::|| ...|::.||.:||:|::||:|: .:|:..|:.|:|.::|.|:.
 Worm   558 WPGFGDNIRVIDWIIRRLDGEQEIGVETPIGTVPAKGSINLEGL-GEVNWDELMSVPADYWKQDA 621

  Fly   615 KDIRTYFESQVGADLPASIYQQLDELSSRVDNL 647
            ::||.:.:.|||.|||..:..::|....||..|
 Worm   622 QEIRKFLDEQVGEDLPEPVRAEMDAQEKRVQTL 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pepck1NP_523784.2 PEPCK 54..644 CDD:279197 336/597 (56%)
pck-2NP_001366912.1 PEPCK_GTP 57..647 CDD:238417 337/595 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167287
Domainoid 1 1.000 466 1.000 Domainoid score I223
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3356
Inparanoid 1 1.050 713 1.000 Inparanoid score I333
Isobase 1 0.950 - 0 Normalized mean entropy S2278
OMA 1 1.010 - - QHG61114
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002991
OrthoInspector 1 1.000 - - mtm4840
orthoMCL 1 0.900 - - OOG6_102518
Panther 1 1.100 - - LDO PTHR11561
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1986
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1312.850

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