DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pepck2 and Pck2

DIOPT Version :10

Sequence 1:NP_611341.1 Gene:Pepck2 / 37130 FlyBaseID:FBgn0034356 Length:638 Species:Drosophila melanogaster
Sequence 2:NP_001101847.2 Gene:Pck2 / 361042 RGDID:1311112 Length:640 Species:Rattus norvegicus


Alignment Length:645 Identity:411/645 - (63%)
Similarity:480/645 - (74%) Gaps:15/645 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLLKGAQL----LRCGLVSPHRNSNFRLTCRFLSIQYGDAKILTPAVKQYVEKCVELCQPERVHI 61
            |.|.|.:|    ||....||.|:..   |.|.||   ||...|...|:.:||:...||||..:||
  Rat     4 MYLPGLRLSWHRLRPWCRSPCRSIQ---TLRVLS---GDLSQLPAGVRDFVERSAHLCQPAGIHI 62

  Fly    62 CDGTEVESKLLQGIMLKKGTIIPLPKYENCWLARTNPADVARVEGKTFISTDSKEQTVPVTEKAT 126
            |||||.|:.....::.::|.|..||||||||||||:|.||||||.||.|.|.|:..|||:.....
  Rat    63 CDGTEAENAATLALLEEQGLIRKLPKYENCWLARTDPKDVARVESKTVIVTSSQRDTVPLLAGGA 127

  Fly   127 PGMLGNWIAEKDMQAAIKERFPGCMKGRTMYVIPFSMGPVGSPLSKIGIEITDSPYVVESMKIMT 191
            .|.||||::..:.|.|:.:||||||:||||||:||||||:|||||:||:::|||||||.||:|||
  Rat   128 SGQLGNWMSPDEFQRAVDQRFPGCMQGRTMYVLPFSMGPLGSPLSRIGVQLTDSPYVVASMRIMT 192

  Fly   192 RAGNPVLNYLQSGDGQFVKCLHSVGTPKSG-VQAMPSWPCDPERTIVLHKPAENEIVSYGSGYGG 255
            |.|..||..|  |||.|:|||||||.|.:| ...:..|||:||:|::.|.|.:.||||:||||||
  Rat   193 RLGTHVLQAL--GDGDFIKCLHSVGQPLTGHGDPVGRWPCNPEKTLIGHVPEQREIVSFGSGYGG 255

  Fly   256 NSLLGKKCLALRIGSTIAKREGWLAEHMLILGITNPQGKKIYIAAAFPSACGKTNLAMMTPTLPG 320
            ||||||||.||||.|.:|:.||||||||||||||||.|||.|:||||||||||||||||.|.|||
  Rat   256 NSLLGKKCFALRIASRLARDEGWLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPG 320

  Fly   321 YKVECVGDDIAWMKFDNKGVLRAINPENGFFGVAPGTSRATNPIAMDTIFRNSVFTNVASTSDGG 385
            :||||||||||||:||::|.||||||||||||||||||..|||.||.||..|:||||||.|||||
  Rat   321 WKVECVGDDIAWMRFDSEGQLRAINPENGFFGVAPGTSATTNPNAMATIQSNTVFTNVAETSDGG 385

  Fly   386 VYWEGMEKDQLKGVTVTDWLGKLWSQESGKPAAHPNSRFCTPASQCPIIDPAWEDSEGVPISAIL 450
            |||||:::....|||||.||||.|.....:|.||||||||.||.||||:|||||..|||||.||:
  Rat   386 VYWEGIDQPLPPGVTVTSWLGKPWKPGDKEPCAHPNSRFCVPARQCPIMDPAWEAPEGVPIDAII 450

  Fly   451 FGGRRPSGVPLVYEARDWKHGVFIGAAMRSEATAAAEFKGKVIMHDPFAMRPFFGYNFGDYLGHW 515
            ||||||.||||||||..|:||||:|:|||||:|||||.|||.|||||||||||||||||.||.||
  Rat   451 FGGRRPKGVPLVYEAFSWRHGVFVGSAMRSESTAAAEHKGKTIMHDPFAMRPFFGYNFGHYLEHW 515

  Fly   516 LSMEQR--GQVPKIFHVNWFRKSSEGKFLWPGFGENSRVLDWIFRRVEGEQCFEDSPIGRLPSKN 578
            ||||.|  .::|:||||||||:...|:|||||||||:||||||.||:.||....::|||.:|.:.
  Rat   516 LSMEGRKGARLPRIFHVNWFRRDEAGRFLWPGFGENARVLDWICRRLGGEDSARETPIGLVPKEG 580

  Fly   579 SLNLDSLENIDLDQLFDLPKDFWEQEVAAIERYFEEQVGHHLPGAVAEELRELKARVADM 638
            :|:|..|..||..|||.:|||||||||..|..|..|||...||..|..||..|:.||..|
  Rat   581 ALDLSGLRAIDTSQLFSIPKDFWEQEVRDIRSYLTEQVNQDLPKEVLAELEALEERVQKM 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Pepck2NP_611341.1 PEPCK_GTP 43..631 CDD:238417 391/590 (66%)
Pck2NP_001101847.2 PEPCK_GTP 44..633 CDD:238417 391/590 (66%)

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