DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a4b

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001170930.1 Gene:slc6a4b / 664770 ZFINID:ZDB-GENE-060314-2 Length:591 Species:Danio rerio


Alignment Length:657 Identity:219/657 - (33%)
Similarity:332/657 - (50%) Gaps:124/657 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NGHEMAPLNTRARGDGTHGVTIVLTAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLG 76
            :|:..||......|..::.|.:::....|:.               ||.||.|.||:||::|.||
Zfish    10 HGNLCAPGPPNNAGYNSNPVPVIIQTESRDK---------------WSKKMDFLLSVIGFAVDLG 59

  Fly    77 NIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISS 141
            |:|||||:|.||||||||||:::|.:..|:|||.:||.:||..|.||:.:|..|.|...|||.:.
Zfish    60 NVWRFPYICYQNGGGAFLIPYVLMAVFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIGFAI 124

  Fly   142 CIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGTGFELEECAKSSETTYF------WYR 200
            ||:.|:|:.|||.||.|..||.::||...|||:||   ...:..|.|     |.||      |  
Zfish   125 CIIALYVSFYYNTIIAWALFYFYSSFSSTLPWTSC---DNDWNTENC-----TNYFGKDNVTW-- 179

  Fly   201 TTLDAAP----------SMDEPGGL------KWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTS 249
            |....:|          ::.|..||      :|.::|||.|.:|||:|.:.||:::|||||:.|:
Zfish   180 TNYSRSPAEEFYTRNVLAVHESSGLGNVGYIRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTA 244

  Fly   250 LFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSY 314
            ..||:||.|..|||.||.||..|::....||.|||.|.:||:|||.|:|:|.|..||.|:|..||
Zfish   245 TLPYVVLLILMIRGATLPGAWKGVVFYLNPKWEKLKETSVWVDAAAQIFFSLGPGFGVLLALSSY 309

  Fly   315 NTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATV-NVDRCVASNTEILVKNKLLGLNDTQ 378
            |...|||.||.::.|:.|.:|:..:..|||.:||:.|.. ||      |.|.:.::|        
Zfish   310 NPFTNNCYRDAIVTSLVNCLTSFVSGFVIFTVLGYMAEQRNV------NVEDVARDK-------- 360

  Fly   379 GYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLS 443
                                             |..|.||.:.:||..:.|:.|:|::||.|:::
Zfish   361 ---------------------------------GPSLLFITYPEAIANMVGSTFFAIIFFVMMIT 392

  Fly   444 LGLGSQIGILEGMLCTLFD--IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAG 506
            |||.|..|.||.::..:.|  .|::...::..|.|:| :.||:......|..|.|.:|:.:.|..
Zfish   393 LGLDSTFGGLEAIITAVMDEYPDVLSHRRELFVLGLV-VVCFLGSLSTLTKGGAYVVKLLEEFGV 456

  Fly   507 TIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVI 571
            ...::.:..:|..||.:.||..||:.||..|.||.||.:|:..|..|.|..:..|::||::    
Zfish   457 GSSIIAIVFLEATAVSWFYGINRFSNDIKSMLGYTPGLFWKVCWVAISPAFLAYIIISSLL---- 517

  Fly   572 RNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFL-----------MRSFQCLKVD 625
             ||      ..|.:.:.: :|:|.:.:...:..:..:.:||..:           .|...||:.:
Zfish   518 -NP------QTLTLFDYE-FPDWSITVGYIIGASSFIWIPIYMVYKLVWTPGSLKQRLAVCLRPE 574

  Fly   626 L---DIH 629
            .   |||
Zfish   575 RTLPDIH 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 207/597 (35%)
slc6a4bNP_001170930.1 SLC6sbd_SERT 38..574 CDD:271399 211/620 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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