DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a4b

DIOPT Version :10

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001170930.1 Gene:slc6a4b / 664770 ZFINID:ZDB-GENE-060314-2 Length:591 Species:Danio rerio


Alignment Length:657 Identity:219/657 - (33%)
Similarity:332/657 - (50%) Gaps:124/657 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NGHEMAPLNTRARGDGTHGVTIVLTAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLG 76
            :|:..||......|..::.|.:::....|:.               ||.||.|.||:||::|.||
Zfish    10 HGNLCAPGPPNNAGYNSNPVPVIIQTESRDK---------------WSKKMDFLLSVIGFAVDLG 59

  Fly    77 NIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISS 141
            |:|||||:|.||||||||||:::|.:..|:|||.:||.:||..|.||:.:|..|.|...|||.:.
Zfish    60 NVWRFPYICYQNGGGAFLIPYVLMAVFGGVPLFYMELALGQFHRTGAISIWKHICPIFKGIGFAI 124

  Fly   142 CIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGTGFELEECAKSSETTYF------WYR 200
            ||:.|:|:.|||.||.|..||.::||...|||:||   ...:..|.|     |.||      |  
Zfish   125 CIIALYVSFYYNTIIAWALFYFYSSFSSTLPWTSC---DNDWNTENC-----TNYFGKDNVTW-- 179

  Fly   201 TTLDAAP----------SMDEPGGL------KWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTS 249
            |....:|          ::.|..||      :|.::|||.|.:|||:|.:.||:::|||||:.|:
Zfish   180 TNYSRSPAEEFYTRNVLAVHESSGLGNVGYIRWQLMLCLFLIFTIVYFSLWKGVKTSGKVVWVTA 244

  Fly   250 LFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSY 314
            ..||:||.|..|||.||.||..|::....||.|||.|.:||:|||.|:|:|.|..||.|:|..||
Zfish   245 TLPYVVLLILMIRGATLPGAWKGVVFYLNPKWEKLKETSVWVDAAAQIFFSLGPGFGVLLALSSY 309

  Fly   315 NTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATV-NVDRCVASNTEILVKNKLLGLNDTQ 378
            |...|||.||.::.|:.|.:|:..:..|||.:||:.|.. ||      |.|.:.::|        
Zfish   310 NPFTNNCYRDAIVTSLVNCLTSFVSGFVIFTVLGYMAEQRNV------NVEDVARDK-------- 360

  Fly   379 GYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLS 443
                                             |..|.||.:.:||..:.|:.|:|::||.|:::
Zfish   361 ---------------------------------GPSLLFITYPEAIANMVGSTFFAIIFFVMMIT 392

  Fly   444 LGLGSQIGILEGMLCTLFD--IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAG 506
            |||.|..|.||.::..:.|  .|::...::..|.|:| :.||:......|..|.|.:|:.:.|..
Zfish   393 LGLDSTFGGLEAIITAVMDEYPDVLSHRRELFVLGLV-VVCFLGSLSTLTKGGAYVVKLLEEFGV 456

  Fly   507 TIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVI 571
            ...::.:..:|..||.:.||..||:.||..|.||.||.:|:..|..|.|..:..|::||::    
Zfish   457 GSSIIAIVFLEATAVSWFYGINRFSNDIKSMLGYTPGLFWKVCWVAISPAFLAYIIISSLL---- 517

  Fly   572 RNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFL-----------MRSFQCLKVD 625
             ||      ..|.:.:.: :|:|.:.:...:..:..:.:||..:           .|...||:.:
Zfish   518 -NP------QTLTLFDYE-FPDWSITVGYIIGASSFIWIPIYMVYKLVWTPGSLKQRLAVCLRPE 574

  Fly   626 L---DIH 629
            .   |||
Zfish   575 RTLPDIH 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 207/597 (35%)
slc6a4bNP_001170930.1 SLC6sbd_SERT 38..574 CDD:271399 211/620 (34%)

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