DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a4a

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001035061.1 Gene:slc6a4a / 664719 ZFINID:ZDB-GENE-060314-1 Length:646 Species:Danio rerio


Alignment Length:659 Identity:219/659 - (33%)
Similarity:337/659 - (51%) Gaps:104/659 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KIIDAPRNGH---EMAPLNTRARGDGTHGVT--IVLTAPQR------NSVQSVDIPGN------- 51
            |:.::..||.   :..|...:..|.|...|:  ...|:||.      .....|:.||.       
Zfish    19 KVPESQENGRLVVDSVPEKDQKSGSGPGQVSNGYRSTSPQSPKEGAGTGTDRVNTPGTFRTLVVQ 83

  Fly    52 ----EPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIE 112
                :|.|..||.||.|.||:|||:|.|||:|||||:|.||||||||:|:::|.:..|:|||.:|
Zfish    84 QTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYME 148

  Fly   113 LGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCP 177
            |.:||..|.|.:.:|..:.|...|||.:.||:.|::|.|||.|:.|..:||.:|||..|||::| 
Zfish   149 LALGQFHRSGCISIWKHVCPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRATLPWTTC- 212

  Fly   178 LNGTGFELEECAK--SSETTYFWYRTTLDAA--------------PSMDEPGGLKWWIVLCLMLS 226
              ...:....|..  |::....|...::..|              |.:.:.|.:.|.:.|||:..
Zfish   213 --NNRWNTPNCTHYLSTDLNVSWTNNSISPAEEFYVRQVLQVHLSPGLHQLGWVSWQLALCLLFI 275

  Fly   227 WTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWL 291
            :|:|:|.:.||:::|||||:.|:.|||:||.|..|||.||.||..|::....|..:|||..||||
Zfish   276 FTVVYFSIWKGVKTSGKVVWVTATFPYLVLLILLIRGATLPGAWRGVVFYLKPDWKKLLTTTVWL 340

  Fly   292 DAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVD 356
            |||.|:|:|.|..||.|:||.|||...|||.:|.|:.|..|.:|:..:..|||.:||:.|.:.  
Zfish   341 DAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMR-- 403

  Fly   357 RCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFT 421
                                .||.|                   ::|.:     .|..|.||::.
Zfish   404 --------------------QQGVE-------------------TVAKD-----AGPSLLFIIYA 424

  Fly   422 QAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFD--IDIIKRVKKQHVTGVVCLFCFI 484
            :||..:|.|.|:|::||.|::.|||.|....|||::..:.|  ..::.|.::..|.|:||: |::
Zfish   425 EAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLGLVCV-CYL 488

  Fly   485 VGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWT 549
            ......|..|.:.:|:|:.:|....::.|..:|:|||.:.||..||..|:..|.|:.||.:|:..
Zfish   489 GALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQLMLGFAPGLFWRVC 553

  Fly   550 WRYIGPVIMVCILVSSVVF---MVIRNPTYGAWNADLG-MIEQKSY---PNWVM-------GIAL 600
            |..|.|..::.|:||.:.|   :.:.:..|..|...|| .|...|:   |::::       |...
Zfish   554 WIAICPCFLLFIIVSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSSFICVPSYMVYHLVTTKGTFQ 618

  Fly   601 SMILAGVLP 609
            ..:|.|:.|
Zfish   619 QRLLKGITP 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 205/587 (35%)
slc6a4aNP_001035061.1 SLC5-6-like_sbd 91..628 CDD:294310 205/587 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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