DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and SLC6A1

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001335179.1 Gene:SLC6A1 / 6529 HGNCID:11042 Length:599 Species:Homo sapiens


Alignment Length:631 Identity:219/631 - (34%)
Similarity:335/631 - (53%) Gaps:104/631 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NGHEMAPLNTRARGDGTHGVTIVLTAPQRN--------SVQ--SVDIPGNEPERAAWSGKMQFFL 66
            ||.::|        ||... |.|..||..|        .||  :.|:    |:|..|.|:..|.:
Human     4 NGSKVA--------DGQIS-TEVSEAPVANDKPKTLVVKVQKKAADL----PDRDTWKGRFDFLM 55

  Fly    67 SIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIH 131
            |.:||::||||:|||||||.:|||||||||:.:.||..|:||||:|..:||...:|.||||. :.
Human    56 SCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFLLECSLGQYTSIGGLGVWK-LA 119

  Fly   132 PWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC--PLNGTGFELEECAK---- 190
            |...|:|:::.:::.::.:||.|||:|..:||:|||...|||..|  |.|     .:.|..    
Human   120 PMFKGVGLAAAVLSFWLNIYYIVIISWAIYYLYNSFTTTLPWKQCDNPWN-----TDRCFSNYSM 179

  Fly   191 ------SSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTS 249
                  :|....||.|........:|:||.::|.:.:.|.::|.:|:|.:.||:..:||||||::
Human   180 VNTTNMTSAVVEFWERNMHQMTDGLDKPGQIRWPLAITLAIAWILVYFCIWKGVGWTGKVVYFSA 244

  Fly   250 LFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSY 314
            .:|||:|.|.|.||:||.||..|::...||...||.:..||||||||:|:|:||..|||||.|||
Human   245 TYPYIMLIILFFRGVTLPGAKEGILFYITPNFRKLSDSEVWLDAATQIFFSYGLGLGSLIALGSY 309

  Fly   315 NTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQG 379
            |:..||..||.::|...|:.|:::|..|||:|:||.|.| ..|.:|                   
Human   310 NSFHNNVYRDSIIVCCINSCTSMFAGFVIFSIVGFMAHV-TKRSIA------------------- 354

  Fly   380 YEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSL 444
                                       |.||.|.||||:.:.:|:.:||.:|.||:|||:|||.|
Human   355 ---------------------------DVAASGPGLAFLAYPEAVTQLPISPLWAILFFSMLLML 392

  Fly   445 GLGSQIGILEGMLCTLFD-IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSF-AGT 507
            |:.||...:||.:..|.| ...:.|.:::.....||:..:::|....|..|.|..|:||.: |..
Human   393 GIDSQFCTVEGFITALVDEYPRLLRNRRELFIAAVCIISYLIGLSNITQGGIYVFKLFDYYSASG 457

  Fly   508 IGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFM--- 569
            :.|:.:...|.:::.:.||..||.::|.:|.|.||..:|:..|.:..|:|:..:.:.|.|.|   
Human   458 MSLLFLVFFECVSISWFYGVNRFYDNIQEMVGSRPCIWWKLCWSFFTPIIVAGVFIFSAVQMTPL 522

  Fly   570 VIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFL 615
            .:.|..:..|...:|         |:|.::..:::.|.  |..:||
Human   523 TMGNYVFPKWGQGVG---------WLMALSSMVLIPGY--MAYMFL 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 205/578 (35%)
SLC6A1NP_001335179.1 SLC6sbd_GAT1 2..599 CDD:212075 219/631 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 577..599
PDZ-binding 597..599
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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