DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Slc6a17

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001028251.1 Gene:Slc6a17 / 613226 RGDID:1587185 Length:727 Species:Rattus norvegicus


Alignment Length:634 Identity:292/634 - (46%)
Similarity:418/634 - (65%) Gaps:44/634 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQR 118
            :|.||:.|:|:.|:.||:|||||||||||||||:|||||:|:|::|:||:.|||||.:||.:|||
  Rat    59 DRPAWNSKLQYILAQIGFSVGLGNIWRFPYLCQKNGGGAYLVPYLVLLIIIGIPLFFLELAVGQR 123

  Fly   119 MRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPL--NGT 181
            :|.|::|||:.:.|.|||||.|||||.|||.|||||||.|..||.|.||:||||||.||:  |||
  Rat   124 IRRGSIGVWHYVCPRLGGIGFSSCIVCLFVGLYYNVIIGWSVFYFFKSFQYPLPWSECPVIRNGT 188

  Fly   182 GFELE-ECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVV 245
            ...:| ||.|||.|||||||..||.:.|:.|.|||.|.:.:||:::|:||...|:|||||||||:
  Rat   189 VAVVEPECEKSSATTYFWYREALDISNSISESGGLNWKMTVCLLVAWSIVGMAVVKGIQSSGKVM 253

  Fly   246 YFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIA 310
            ||:|||||:||..|.:||:.||||..|::||:|||::|:|:|.||.:||||||::.||.||.:||
  Rat   254 YFSSLFPYVVLACFLVRGLLLRGAVDGILHMFTPKLDKMLDPQVWREAATQVFFALGLGFGGVIA 318

  Fly   311 FGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLG-L 374
            |.|||...|||..|..|||..|..|::.|::|:||:|||||.:..::||..|.|     |:|| |
  Rat   319 FSSYNKQDNNCHFDAALVSFINFFTSVLATLVVFAVLGFKANIMNEKCVVENAE-----KILGYL 378

  Fly   375 ND------------------TQGYEQAMSLL---NGTELLRLQLSECSLAHELDNAAEGTGLAFI 418
            |.                  |:.|.:..:::   ...:...|.|..|.|..|||.:.:|||||||
  Rat   379 NSNVLSRDLIPPHVNFSHLTTKDYSEMYNVIMTVKEKQFSALGLDPCLLEDELDKSVQGTGLAFI 443

  Fly   419 VFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKRVKKQHVTGVVCLFCF 483
            .||:|:...|.:|||:|:||.||::|||||.||.:.|:...:  ||..| |.|:..|...|:|.|
  Rat   444 AFTEAMTHFPASPFWSVMFFLMLINLGLGSMIGTMAGITTPI--IDTFK-VPKEMFTVGCCVFAF 505

  Fly   484 IVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQW 548
            .||.:|...:|.|::.|||.::.|:.|.|:.::|.|||.:|||.::|.:::.:|.|:||.|::.:
  Rat   506 FVGLLFVQRSGNYFVTMFDDYSATLPLTVIVILENIAVAWIYGTKKFMQELTEMLGFRPYRFYFY 570

  Fly   549 TWRYIGPVIMVCILVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIV 613
            .|:::.|:.|..:..:|::.:.:..|.|.||..:........:|||.|.:.:::|....||:|:|
  Rat   571 MWKFVSPLCMAVLTTASIIQLGVSPPGYSAWIKEEAAERYLYFPNWAMALLITLIAVATLPIPVV 635

  Fly   614 FLMRSFQCLKVDLDIHQGSIRRNETTASTKE--MIDNDDDDDEDDENDF 660
            |::|.|..|.      .||   |..:.|.|:  |:.:..:.:|:||..|
  Rat   636 FILRHFHLLS------DGS---NTLSVSYKKGRMMKDISNLEENDETRF 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 279/586 (48%)
Slc6a17NP_001028251.1 SLC6sbd_NTT4 60..648 CDD:271403 282/601 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 680..727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 580 1.000 Domainoid score I204
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H27775
Inparanoid 1 1.050 586 1.000 Inparanoid score I966
OMA 1 1.010 - - QHG48419
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm45479
orthoMCL 1 0.900 - - OOG6_101967
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1148
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.880

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