DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a1l

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_021330952.1 Gene:slc6a1l / 568985 ZFINID:ZDB-GENE-041210-296 Length:578 Species:Danio rerio


Alignment Length:626 Identity:231/626 - (36%)
Similarity:347/626 - (55%) Gaps:86/626 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEG 105
            ||:...:.....|:|.:|.||..|.||.:||::||||:|||||||.:|||||||||:...|:..|
Zfish    13 NSIPVEEKENKIPDRGSWKGKFDFLLSCVGYAIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAG 77

  Fly   106 IPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYP 170
            |||||:|..:||...:|.||||..| |.:.|:|:::.:::.::.:||.:||.|..:|||:|.:..
Zfish    78 IPLFLLETALGQYTSVGGLGVWKLI-PMMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFSSLKAE 141

  Fly   171 LPWSSC--PLNG----TGFELEECAK-SSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWT 228
            |||.:|  |.|.    :.:.|.:... ||..|.||.|........::|||.|:|.:|..|.|||.
Zfish   142 LPWQTCDNPWNTDRCFSNYSLLDTTNLSSAVTEFWERNMHQLTNGLEEPGELRWPLVGTLALSWI 206

  Fly   229 IVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDA 293
            :|:|.:.||::.:||||||::.:||.:|.|.|.||:||.||..|::...||...|||:..|||||
Zfish   207 LVYFSIWKGVEWTGKVVYFSATYPYFMLFILFFRGVTLPGAIDGVLFYITPNFNKLLKSEVWLDA 271

  Fly   294 ATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRC 358
            |||:|:|:||..|||||.||||:..||..||.::|...|:.|:::|.:|||:|:||         
Zfish   272 ATQIFFSYGLGLGSLIALGSYNSFNNNVYRDSVIVCCINSCTSMFAGIVIFSIVGF--------- 327

  Fly   359 VASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQA 423
                                     ||.:....:..|             ||.|.||||:.:.||
Zfish   328 -------------------------MSYITKRPIEEL-------------AASGPGLAFLAYPQA 354

  Fly   424 IVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFD-IDIIKRVKKQHVTGVVCLFCFIVGF 487
            :.:||.:..||:|||:||:.|||.||...:||.:..|.| ...:.|.:|:....:|||..||:||
Zfish   355 VTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPTVLRKRKKIFILIVCLVSFIIGF 419

  Fly   488 IFCTGAGEYWLKMFDSF-AGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWR 551
            ...|..|.|..|:||.: |..:.|:.:...|.|::.:.||.|:|.::|.:|.||||..:|:..|.
Zfish   420 SNITQGGLYVFKLFDYYSASGMCLLFLVFFETISIAWFYGAEKFYKNIEEMIGYRPCGFWKQCWI 484

  Fly   552 YIGPVIMVCILVSSVVFM---VIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIV 613
            |..|.|.:.:...|.:.|   .:....|.||...:|         |:|.:: ||:|   :|..|:
Zfish   485 YFTPTICLGVFTFSAIEMTPLTLGKYVYPAWGQGVG---------WLMSLS-SMVL---IPGYII 536

  Fly   614 FLMRSFQCLKVDLDIHQGSIRR--NETTASTKEMIDNDDDD 652
            ::..|          .:|:||:  ::.|..| |:..:|.:|
Zfish   537 YMFFS----------TKGNIRQRWHKMTKPT-ELTTSDVND 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 219/573 (38%)
slc6a1lXP_021330952.1 SLC5-6-like_sbd 15..558 CDD:320982 226/614 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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