DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a5

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001009557.1 Gene:slc6a5 / 494450 ZFINID:ZDB-GENE-050105-2 Length:786 Species:Danio rerio


Alignment Length:654 Identity:239/654 - (36%)
Similarity:349/654 - (53%) Gaps:130/654 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GTHGVTIVL----TAPQRNSVQSV------DIPGNEPE-RAAWSGKMQFFLSIIGYSVGLGNIWR 80
            ||.|.|.||    |.|..:....:      |..|:|.: |..||.|:.|.||::||:|||||:||
Zfish   138 GTDGNTSVLPGTVTGPPTDDTGRLFQDDDDDDGGDENKARGNWSNKLDFILSMVGYAVGLGNVWR 202

  Fly    81 FPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVT 145
            ||||..||||||||||:::||.|.|||:||:|:.:||....|.:.||..| |.|.|.||:..|::
Zfish   203 FPYLAFQNGGGAFLIPYLIMLGLAGIPIFLLEVSLGQFASQGPVSVWKAI-PALQGCGIAMLIIS 266

  Fly   146 LFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGTGFE--------LEEC-------AKSSETT 195
            :.:|:|||:|:.|..:|||.|.:..|||::|.......|        |:.|       .....||
Zfish   267 VLIAIYYNIIMCWTLYYLFASLKETLPWATCKNEWNTVECKDKDMLLLDTCILRDRNITSIKNTT 331

  Fly   196 ------------------------------YFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIV 230
                                          ||.| ..|..:..::.||.::|.:..||.|:|.||
Zfish   332 FCLSANVVGNLSKLLNVTVDNKTYVSPSEEYFKY-NVLHISKGIEYPGDIRWPLAACLFLAWLIV 395

  Fly   231 FFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAAT 295
            :..:.|||:|||||||||:.|||:||.|..|||:||.|||:|:::..|||.|||.:..||.||||
Zfish   396 YASLAKGIKSSGKVVYFTATFPYVVLVILLIRGVTLPGAGSGILYFITPKWEKLNDAKVWKDAAT 460

  Fly   296 QVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVA 360
            |:|:|...|:|.||...|||...|||.||.|:|:..|:.|:|:|..|||:::||           
Zfish   461 QIFFSLSAAWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGF----------- 514

  Fly   361 SNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHEL-----DNAAEGTGLAFIVF 420
                                                     :||||     ..|.||.|:||:|:
Zfish   515 -----------------------------------------MAHELKVPIESVADEGPGIAFVVY 538

  Fly   421 TQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIK--RVKKQHVTGVVCLFCF 483
            .:|:..||.:||||::||.|||:|||.:....:|.::.::.| :..|  |..|...|.|.||..|
Zfish   539 PEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSD-EFPKYLRKHKPQFTLVCCLSFF 602

  Fly   484 IVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQW 548
            ::||...|.:|.|.|::.|:||.:..||::|:.|::.:.:|||.:||.|||..|.|::|.::|:.
Zfish   603 VLGFPMITESGMYMLQLVDTFAASYSLVIIAIFELVGISYIYGLQRFCEDIEMMIGFQPNKFWRV 667

  Fly   549 TWRYIGPVIMVCILVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIV 613
            .|.::.|.|:..||..|:....:.  ||          |..:||||.|.:...|::..|:.:||:
Zfish   668 CWAFVTPTILTFILALSLYQWKVM--TY----------EDYTYPNWSMVLGWLMVICSVIWIPIM 720

  Fly   614 FLMR 617
            |.::
Zfish   721 FAIK 724

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 228/613 (37%)
slc6a5NP_001009557.1 SLC5-6-like_sbd 177..775 CDD:294310 228/615 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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