DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a1b

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001007363.1 Gene:slc6a1b / 492490 ZFINID:ZDB-GENE-041114-57 Length:600 Species:Danio rerio


Alignment Length:645 Identity:223/645 - (34%)
Similarity:342/645 - (53%) Gaps:87/645 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 MAPLNTRARGDGTHGVTIVLTAPQRNS-----VQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGL 75
            ||...|:| .|| |.:|.|..||..|.     |..|......|:|..|.||..|.||.:||::||
Zfish     1 MATNGTKA-SDG-HVLTEVNEAPTANDKPKTLVVKVQKKKELPDRETWQGKFDFLLSCVGYAIGL 63

  Fly    76 GNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGIS 140
            ||:|||||||.:|||||||||:.:.||..|:|||.:|..:||...:|.||||. :.|...|:|::
Zfish    64 GNVWRFPYLCGKNGGGAFLIPYFLTLIFAGVPLFFLETALGQYTSIGGLGVWK-LAPMFKGVGLA 127

  Fly   141 SCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC--PLNGTGFELEECAK----------SSE 193
            :.:::.::.:||.|||.|..:||:|||...|||.||  |.|     .::|..          :|.
Zfish   128 AAVLSFWLNIYYIVIIAWAIYYLYNSFTTDLPWKSCDNPWN-----TDKCFSNYSMANIGNMTSA 187

  Fly   194 TTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTI 258
            ...||.|........:::||.::..:.:.|.::|.:|:|.:.||:..:||||||::.:||.:|.|
Zfish   188 VVEFWERNMHQLTDGLEKPGEIRLPLAITLAIAWVLVYFCIWKGVGWTGKVVYFSATYPYFMLFI 252

  Fly   259 FFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVR 323
            .||||:||.||..|::...||:..||.|..||||||||:|:|:||..|||||.||||...||..:
Zfish   253 LFIRGVTLPGAKEGILFYVTPEFSKLKESEVWLDAATQIFFSYGLGLGSLIALGSYNPFNNNVYK 317

  Fly   324 DVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLN 388
            |.::|...|:.|:::|..|||:|:||.|.: ..|.:|                            
Zfish   318 DSIIVCCINSFTSMFAGFVIFSIVGFMAHI-TKRPIA---------------------------- 353

  Fly   389 GTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGIL 453
                              |.||.|.||||:.:.:|:.:||.:|.||||||:|||.||:.||...:
Zfish   354 ------------------DVAASGPGLAFLAYPEAVTQLPISPLWAVLFFSMLLMLGIDSQFCTV 400

  Fly   454 EGMLCTLFD-IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSF-AGTIGLVVVALM 516
            ||.:..|.| .....|.:::....||||..:::|....|..|.|..|:||.: |..:.|:.:...
Zfish   401 EGFITALVDEFPRALRGRREIFIAVVCLVSYLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFF 465

  Fly   517 EMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMV---IRNPTYGA 578
            |.:::.:.||..:|..::.:|.||:|..:|:..|....|:|:..:.:.|.|.||   :.|..:..
Zfish   466 ECVSISWFYGVNKFYGNLEEMIGYKPCIWWKLCWVVFTPLIVAGVFLFSAVQMVPLTLNNYVFPK 530

  Fly   579 WNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMRSF-QCLKVDLDIHQGSIRRNE 637
            |...:|         |.|.::..:::.|.:....:.|..|: :.|::.:.....::|..|
Zfish   531 WGQGVG---------WCMALSSMVLIPGYMGYMFLTLKGSYKERLRIMIQPTAAAVRTQE 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 204/578 (35%)
slc6a1bNP_001007363.1 SLC5-6-like_sbd 2..600 CDD:294310 222/644 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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