DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43066 and Gat

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster


Alignment Length:656 Identity:211/656 - (32%)
Similarity:326/656 - (49%) Gaps:134/656 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NTRARGDGTHGV----TIVL-------TAPQRNSVQSVDIPGNE--------PERAAWSGKMQFF 65
            |:.:.|||...|    :|.:       |:.|.:|..:.|....:        |:|.:||.||.|.
  Fly     4 NSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFI 68

  Fly    66 LSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTI 130
            ||::|.::||||:|||||||.:||||||::|:::.|.|.|||:|.:||.:||.:.:|.|||:. |
  Fly    69 LSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK-I 132

  Fly   131 HPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC------------------- 176
            .|...|||.::.:::.::.:||.||:.|..||.|.|.|..:||.:|                   
  Fly   133 APIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLH 197

  Fly   177 -----------------PLNGTGFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLM 224
                             .||.|..||.:..|.     ||.|..|..:..::|.|.::|.:...|:
  Fly   198 CWDKIINGTTQKVCSVSALNITSLELTDPVKE-----FWERRALQISHGIEEIGNIRWELAGTLL 257

  Fly   225 LSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTV 289
            |.|.:.:|.:.||::.:|||||||:||||::|||..:|||||.||..|:.....|...||....|
  Fly   258 LVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEV 322

  Fly   290 WLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVN 354
            |:||.||:|:|:||..|:|:|.||||...||..:|.|:|...|:.|:::|..|||:::||     
  Fly   323 WIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGF----- 382

  Fly   355 VDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHE-----LDNAAEGTG 414
                                                           :|||     .|.||.|.|
  Fly   383 -----------------------------------------------MAHEQQRPVADVAASGPG 400

  Fly   415 LAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFD-IDIIKRVKKQHVTGVV 478
            |||:|:..|:::|||:|.|:.|||.|||.:||.||...:||.:..:.| ...:.|.:|:....:|
  Fly   401 LAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIV 465

  Fly   479 CLFCFIVGFIFCTGAGEYWLKMFDSFA-GTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRP 542
            |...::||....|..|.|..::.||:| ....|:.:...|.:::.:.||.:||.:.|..|.||.|
  Fly   466 CALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYP 530

  Fly   543 GRYWQWTWRYIGPVIMVCILVSSVV-FMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAG 606
            ..:|::.|....|.|.:.:...::| :..::...|             |||.|.........|:.
  Fly   531 TVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDY-------------SYPWWAHAFGWFTALSS 582

  Fly   607 VLPMPI 612
            :|.:|:
  Fly   583 MLYIPL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 200/602 (33%)
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 200/602 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440708
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.