DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Gat

DIOPT Version :10

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_651930.2 Gene:Gat / 43805 FlyBaseID:FBgn0039915 Length:636 Species:Drosophila melanogaster


Alignment Length:656 Identity:211/656 - (32%)
Similarity:326/656 - (49%) Gaps:134/656 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NTRARGDGTHGV----TIVL-------TAPQRNSVQSVDIPGNE--------PERAAWSGKMQFF 65
            |:.:.|||...|    :|.:       |:.|.:|..:.|....:        |:|.:||.||.|.
  Fly     4 NSASDGDGGGDVCKHESIEMSKELGHTTSLQSSSPTTTDTSNKQQLVKIEQLPDRGSWSSKMDFI 68

  Fly    66 LSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTI 130
            ||::|.::||||:|||||||.:||||||::|:::.|.|.|||:|.:||.:||.:.:|.|||:. |
  Fly    69 LSVVGLAIGLGNVWRFPYLCYKNGGGAFILPYIITLFLAGIPMFFMELALGQMLTIGGLGVFK-I 132

  Fly   131 HPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC------------------- 176
            .|...|||.::.:::.::.:||.||:.|..||.|.|.|..:||.:|                   
  Fly   133 APIFKGIGYAAAVMSCWMNVYYIVILAWAVFYFFMSMRADVPWRTCNNWWNTVNCVSQYERKNLH 197

  Fly   177 -----------------PLNGTGFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLM 224
                             .||.|..||.:..|.     ||.|..|..:..::|.|.::|.:...|:
  Fly   198 CWDKIINGTTQKVCSVSALNITSLELTDPVKE-----FWERRALQISHGIEEIGNIRWELAGTLL 257

  Fly   225 LSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTV 289
            |.|.:.:|.:.||::.:|||||||:||||::|||..:|||||.||..|:.....|...||....|
  Fly   258 LVWILCYFCIWKGVKWTGKVVYFTALFPYVLLTILLVRGITLPGALEGIKFYIIPNFSKLTNSEV 322

  Fly   290 WLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVN 354
            |:||.||:|:|:||..|:|:|.||||...||..:|.|:|...|:.|:::|..|||:::||     
  Fly   323 WIDAVTQIFFSYGLGLGTLVALGSYNKFTNNVYKDALIVCTVNSSTSMFAGFVIFSVIGF----- 382

  Fly   355 VDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHE-----LDNAAEGTG 414
                                                           :|||     .|.||.|.|
  Fly   383 -----------------------------------------------MAHEQQRPVADVAASGPG 400

  Fly   415 LAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFD-IDIIKRVKKQHVTGVV 478
            |||:|:..|:::|||:|.|:.|||.|||.:||.||...:||.:..:.| ...:.|.:|:....:|
  Fly   401 LAFLVYPSAVLQLPGSPMWSCLFFFMLLLIGLDSQFCTMEGFITAIIDEWPQLLRKRKEIFIAIV 465

  Fly   479 CLFCFIVGFIFCTGAGEYWLKMFDSFA-GTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRP 542
            |...::||....|..|.|..::.||:| ....|:.:...|.:::.:.||.:||.:.|..|.||.|
  Fly   466 CALSYLVGLTCITQGGMYIFQILDSYAVSGFCLLWLIFFECVSISWCYGVDRFYDGIKDMIGYYP 530

  Fly   543 GRYWQWTWRYIGPVIMVCILVSSVV-FMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAG 606
            ..:|::.|....|.|.:.:...::| :..::...|             |||.|.........|:.
  Fly   531 TVWWKFCWCVTTPAICLGVFFFNIVQWTPVKYLDY-------------SYPWWAHAFGWFTALSS 582

  Fly   607 VLPMPI 612
            :|.:|:
  Fly   583 MLYIPL 588

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 200/602 (33%)
GatNP_651930.2 SLC6sbd-TauT-like 58..611 CDD:271387 200/602 (33%)

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