DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and blot

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_524125.2 Gene:blot / 39939 FlyBaseID:FBgn0027660 Length:976 Species:Drosophila melanogaster


Alignment Length:632 Identity:146/632 - (23%)
Similarity:233/632 - (36%) Gaps:185/632 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 HGVTIVLTAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAF 93
            |.:|   ||.....:.:|:...|:..:.:....:...|.:   ::...|:.|||....:. |.|:
  Fly   192 HNIT---TASNAKLLPAVEDESNKQTKCSVFRGLVLCLCL---NLSYANVVRFPRELDRY-GSAY 249

  Fly    94 LIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGIS---SCIVTLFVALYYNVI 155
            |:|::|:|.|.|:|:.|:|:.:||.:..||...|.....:.|...||   |.:..::|:|...:.
  Fly   250 LVPYVVLLFLVGLPMVLLEISVGQFLGQGAAHTWRASPIFKGACMISRFASWLSAIWVSLQAVLA 314

  Fly   156 ITWVFFYLFNSFRYPLPWSSCP------LNG---TGFELEECAKSSETTYFW----YRTTLDAAP 207
            :.::..:..|.    ||:..|.      |:|   ||...:||.:.:..|.||    |...|.|  
  Fly   315 LAYIGMFASND----LPFRECAGPVKLRLSGYLLTGTSGQECLQLTFLTPFWRNPLYFGLLAA-- 373

  Fly   208 SMDEPGGLKWWIV--LC-----LMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGIT 265
                 |.:..|||  ||     ::.....||.:|       |.|:..|       ||.:.:|...
  Fly   374 -----GLIGLWIVVMLCTHNAKILRRSIFVFGLV-------GLVLLCT-------LTGWEVRNSF 419

  Fly   266 LRGAGAGLMHMYTPKV-----EKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDV 325
            .|       | |.|::     ..|.|..:|.:|..||.:|....||:|.........|.:.|| .
  Fly   420 SR-------H-YFPELWGFDSNLLAESNIWFNALMQVLFSVNCGFGALPMITGKFLYKGDAVR-T 475

  Fly   326 LLVSVC-----NAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMS 385
            .:|.:|     ||:     :|.:|       .|..|               |..|..|..|:...
  Fly   476 SVVYLCFNLLINAI-----AVTLF-------MVQFD---------------LSSNGFQNMEELKP 513

  Fly   386 L-------LNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLS 443
            |       |||:.                   ||.       :..:..|..:..:|::       
  Fly   514 LTAIYDRVLNGSR-------------------EGD-------SHLLQHLVPSLIYALI------- 545

  Fly   444 LGLGSQIGILEGMLCTLFDIDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDS-FAGT 507
                    ||..|:.....:....|:..:....|:||...:|..|..........::.|| ..||
  Fly   546 --------ILSAMVSITVAVYTSTRLVPRRPNYVICLIGLVVAVISFAAPKFLIARVLDSRLVGT 602

  Fly   508 IGLVVVALM-EMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVI 571
              :||.||: |:||:.:|||.:....|:....|....|.|.|.| .|.|.|:..|||        
  Fly   603 --MVVTALVFELIAITWIYGAKNIYTDLEFSIGRPIFRVWMWLW-VICPAILTGILV-------- 656

  Fly   572 RNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLP--MPIVFLM 616
                  .|.||....:               :||..||  .||:|::
  Fly   657 ------WWCADDDQYD---------------LLAEYLPRWAPILFVL 682

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 140/606 (23%)
blotNP_524125.2 SLC5-6-like_sbd 219..659 CDD:271356 130/562 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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