DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43066 and CG4476

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_648293.1 Gene:CG4476 / 39056 FlyBaseID:FBgn0035969 Length:629 Species:Drosophila melanogaster


Alignment Length:692 Identity:200/692 - (28%)
Similarity:319/692 - (46%) Gaps:145/692 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGI 106
            :::|.::..:...|..|...::|.:|.|..||||||:||||:...:|||||||||::|:|.:.|.
  Fly    38 ALESSELSPDRKARDNWGSSLEFLMSCIALSVGLGNVWRFPFTALENGGGAFLIPYLVVLFVVGK 102

  Fly   107 PLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPL 171
            |::.:|:.:||....|.:.|:: ..|.:.|:|.:..:....:|.||..::.....|.|:||...|
  Fly   103 PIYYMEMLLGQFSSRGIVQVFD-FAPLMRGVGYAQLLALGVLATYYASVMALTLRYFFDSFASEL 166

  Fly   172 PWSSC---------------PLNGTGFELEECAK--SSETTYFWYRTTLDAAPSMDE----PGGL 215
            |||.|               ||.|      :.::  ||.|..:..|..|:...|::|    |.|.
  Fly   167 PWSFCREEWGDGCVSASGGQPLQG------QLSRNFSSSTQLYLQRIVLNETDSLEEGIGYPSGS 225

  Fly   216 KWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPK 280
               :.|.|.:||..|..|:::|::||||..|..:||||:|:.|..:|.:||.||..|:|:..||:
  Fly   226 ---LALMLGISWLTVTLIIIRGVKSSGKAAYVLALFPYVVMFILLVRALTLPGAYDGVMYFLTPQ 287

  Fly   281 VEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFA 345
            .||||||.||.:|.||||:|..:.||.:|.:.|||...:|..||..:|:..:..|::.:.|:||.
  Fly   288 WEKLLEPQVWYNAVTQVFFSLAVCFGVIIMYSSYNRFGHNVYRDANIVTTLDTFTSLLSGVIIFG 352

  Fly   346 ILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHE---LD 407
            |||                                                    :||||   .|
  Fly   353 ILG----------------------------------------------------NLAHESGTKD 365

  Fly   408 NAA---EGTGLAFIVFTQAIVELPGAP-FWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKR 468
            .|:   .|.|||||.:..||.:....| .:::|||.||..||:||.:|::..::..|.|..:  .
  Fly   366 IASVVKAGPGLAFISYPDAIAKFKMFPQVFSLLFFAMLFMLGVGSNVGMVSCIMTVLKDQFV--N 428

  Fly   469 VKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTED 533
            ||...:...:.:..|:||.|:.|..|::.:.:.|....|...:|.|:.|:|||.:|||.:|..:|
  Fly   429 VKLWIIVVSLSVIGFLVGLIYITPGGQHIITLMDFHGVTFVSLVSAIFELIAVGWIYGTKRLCQD 493

  Fly   534 IFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVIRNPTYGAWNADLGMIEQKSYP--NWVM 596
            ...|...:...|::..|..:.|::|:.|||.|::.|  |..:|..          :.:|  ..|:
  Fly   494 AEYMLNIKTSNYYRICWSIVTPLVMLVILVYSLLTM--RPLSYNG----------QEFPLVYRVV 546

  Fly   597 GIALSMILAGVLPMPIVFLMRSFQCLKVDLDIHQGSIRRNETTASTKEMIDNDDDDDEDDENDFS 661
            |..:|..:.|.|     |....:...|             :...|.|..|:|.            
  Fly   547 GWCVSGCIIGQL-----FYWAGYANFK-------------QPKGSLKSRINNS------------ 581

  Fly   662 GPALGGHVKTQSDFSDDDEEDKPMTMRMMMMRPTTTTKTSNV 703
                   :|..||:...|  .|.:....|.:|......:.||
  Fly   582 -------IKPHSDWGPSD--PKKLMDYQMFLRNKDEENSKNV 614

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 185/591 (31%)
CG4476NP_648293.1 SLC6sbd 52..526 CDD:271359 173/537 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440728
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.