DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and SerT

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_001369117.1 Gene:SerT / 37895 FlyBaseID:FBgn0010414 Length:768 Species:Drosophila melanogaster


Alignment Length:640 Identity:215/640 - (33%)
Similarity:331/640 - (51%) Gaps:101/640 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 APRNGHEMAPLN--TRARGDGTHGVTIVLTAP--------QRNSVQSVDIPGNEPERAAWSGKMQ 63
            ||.:..:.:|.|  .....||.|.....:|.|        :|..|.||    .|..|..|..|.:
  Fly    22 APWSDDKESPNNEDDSNEDDGDHTTPAKVTDPLAPKLANNERILVVSV----TERTRETWGQKAE 82

  Fly    64 FFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWN 128
            |.|::||::|.|||:|||||:|.||||||||:|:.:.||..|:|||.:||.:||..|.|.|.:|.
  Fly    83 FLLAVIGFAVDLGNVWRFPYICYQNGGGAFLVPYCLFLIFGGLPLFYMELALGQFHRCGCLSIWK 147

  Fly   129 TIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSC--PLNGTGFELEECAK- 190
            .|.|.|.|:|.:.|::.:::.:|||.||.|..:|||.||...|||:||  |.|     .|.|.: 
  Fly   148 RICPALKGVGYAICLIDIYMGMYYNTIIGWAVYYLFASFTSKLPWTSCDNPWN-----TENCMQV 207

  Fly   191 ---------SSETTYFWYRTTLDA--APSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKV 244
                     :|....|:.|..|::  ...:|..|.:|..:.||:...:.:|:|.:.||::|:|||
  Fly   208 TSENFTELATSPAKEFFERKVLESYKGNGLDFMGPVKPTLALCVFGVFVLVYFSLWKGVRSAGKV 272

  Fly   245 VYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLI 309
            |:.|:|.||:||.|..:||::|.||..|:.:..||:..||....||:|||:|:|:|.|..||:|:
  Fly   273 VWVTALAPYVVLIILLVRGVSLPGADEGIKYYLTPEWHKLKNSKVWIDAASQIFFSLGPGFGTLL 337

  Fly   310 AFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATV---NVDRCVASNTEILVKNKL 371
            |..|||...|||.||.|:.|..|.:|:..|..|||::||:.|.|   ::|:              
  Fly   338 ALSSYNKFNNNCYRDALITSSINCLTSFLAGFVIFSVLGYMAYVQKTSIDK-------------- 388

  Fly   372 LGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVL 436
            :||                                    ||.||.|||:.:||..:.|:.||:::
  Fly   389 VGL------------------------------------EGPGLVFIVYPEAIATMSGSVFWSII 417

  Fly   437 FFTMLLSLGLGSQIGILEGMLCTLFD--IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLK 499
            ||.||::|||.|..|.||.|:..|.|  ..:|.|.::..|. ::..|.|:......|..|...:.
  Fly   418 FFLMLITLGLDSTFGGLEAMITALCDEYPRVIGRRRELFVL-LLLAFIFLCALPTMTYGGVVLVN 481

  Fly   500 MFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVS 564
            ..:.:...:.::.|..:|...|.:.||.:||:.|:.||.|.:||.:|:..|.||.||.::.|.:.
  Fly   482 FLNVYGPGLAILFVVFVEAAGVFWFYGVDRFSSDVEQMLGSKPGLFWRICWTYISPVFLLTIFIF 546

  Fly   565 SVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMRSF 619
            |::          .:...||  |:..||:|...:..::..:.||.:|:..:.:.|
  Fly   547 SIM----------GYKEMLG--EEYYYPDWSYQVGWAVTCSSVLCIPMYIIYKFF 589

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 200/580 (34%)
SerTNP_001369117.1 SLC6sbd_SERT-like 74..607 CDD:271388 201/584 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45440731
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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