DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43066 and bdg

DIOPT Version :10

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_611064.2 Gene:bdg / 36747 FlyBaseID:FBgn0034049 Length:1331 Species:Drosophila melanogaster


Alignment Length:635 Identity:140/635 - (22%)
Similarity:243/635 - (38%) Gaps:149/635 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 LSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTI 130
            |::||.::|:.|:.||..| ..|.||.||:.|:::.::.||||..:::.:|.::|.|.:.:|. |
  Fly   505 LALIGCTLGVFNMCRFAVL-TINFGGNFLLQFLLLSVIFGIPLLWLQMCLGAKIRAGPVSMWK-I 567

  Fly   131 HPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSF-----------RYPLPWSSCPLNGTGFE 184
            .|...|:||:..:...|:|||..|.:.|:..||.:.|           ....|:.....|.||..
  Fly   568 SPICAGVGIALVMQQCFLALYSTVSLAWILVYLRDVFPTAARSGYRWQEMAFPYRYDASNATGNL 632

  Fly   185 LEECAKSSETTYF----WYRTTLDAAPSMDEPGGLKWWI-----VLCLMLSWTIVFFIVMKGIQS 240
            .:..|:     ||    ..|..|...|   :..|:::.:     ...|.|.|..||.|:.||::|
  Fly   633 TQTVAE-----YFNVVVLQRLHLANHP---DASGIRFHVNDRQLAFYLALIWAAVFLILCKGLKS 689

  Fly   241 SGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTP-KVEK----------LLEPTVWLDAA 294
            .||:.|.....|.:.|.:     :|     |..:::..| :::.          |:....|..|.
  Fly   690 LGKLAYIIYTLPLVALAV-----VT-----AKFVYVVDPSRIQNIFAASDFDDFLVNSNSWTAAT 744

  Fly   295 TQVFYSFGLAFGSLIAFGS---YNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVD 356
            .:.|.::||...|:||..|   .|..|....||.:|             :|:|.::|......:.
  Fly   745 QETFLTWGLLGASVIAITSRSHTNANKAALRRDAIL-------------LVLFTLIGLGLMALLA 796

  Fly   357 RCVASNTEILVKNKLL----GLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEG----- 412
            .|.|   :||.::..:    ...:...|....||.:.|....|......:.|......|.     
  Fly   797 LCCA---QILWQHGYVYVPGSFENPDCYTSIYSLQSNTNPYLLSYPRSLIPHYSSFIGETYRRNR 858

  Fly   413 ---------TGLAFI--VFTQAIVELPGAPF---WAVLFFTMLLSLGLGSQIGILEGMLCTLFDI 463
                     ..|.||  :| .|::.|.....   ||.:.|......||        ..||.::  
  Fly   859 TMIHVESGFQALRFISEIF-PAVLSLASDSISWVWAAVAFATFAGFGL--------AQLCVMW-- 912

  Fly   464 DIIKRVKKQ--HVTGVVCLFCFIVGFI----FCTGAGEYWLKMFDSFAGTIGLV-VVALMEMIAV 521
               |.:...  :.|..|.|.| :.|.:    |.|..|...|...|...|....: ::...::..|
  Fly   913 ---KPISSALGNSTSSVLLSC-VTGLLLSIPFATEMGISILYYVDFLLGGSWFIPIIWTAQIFGV 973

  Fly   522 IFIYGHERFTEDI---FQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVV---------FMVIRNP 574
            ..|.|.....:|:   .::.| ....:...:|..:.|:.::.:   |||         |...|..
  Fly   974 FLIRGRPYNGDDLVNDLRLCG-SMSAFLALSWNVLLPIGLITL---SVVDYKASLSNQFYYWRGK 1034

  Fly   575 TYGA-WNADLGMIEQKSYPNWVMGIALSMILAGV-LPMPIVFLMRSFQCL 622
            :|.. |:..:|                |:|..|| |.:|:..:::.::.|
  Fly  1035 SYFTYWSRKMG----------------SLIQIGVLLVIPVTAIIQIYRYL 1068

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 139/628 (22%)
bdgNP_611064.2 SLC5-6-like_sbd 501..976 CDD:271356 119/521 (23%)

Return to query results.
Submit another query.