DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and RGD1566368

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_002730032.2 Gene:RGD1566368 / 301083 RGDID:1566368 Length:633 Species:Rattus norvegicus


Alignment Length:629 Identity:266/629 - (42%)
Similarity:394/629 - (62%) Gaps:33/629 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ATKIIDAPRNGHEMAPLNTRARGDGTHGVTIVLTAPQRNSVQSVDIPG-NEPERAAWSGKMQFFL 66
            :.:::..|.:|....       |.|..|     ..|.|........|| .|..|..||..:||.|
  Rat     5 SARVVSLPEDGEPCG-------GSGGPG-----QRPGRPRSTECAQPGVVEKVRPKWSNPLQFLL 57

  Fly    67 SIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIH 131
            :.:.|:|||||:||||||||..|||:||:|:::|||:||:||..:||.:|||||.|::|.|.||.
  Rat    58 TCVSYAVGLGNVWRFPYLCQMYGGGSFLVPYLIMLIVEGMPLLYLELAVGQRMRQGSIGAWRTIS 122

  Fly   132 PWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNG--TGFELEECAKSSET 194
            |:|.|:||:|.:|::.|::|||||.||..:|||:||:.|||||.||||.  ||:: |||.|:|.|
  Rat   123 PYLSGVGIASLVVSVLVSVYYNVINTWAIWYLFHSFQDPLPWSVCPLNSNRTGYD-EECEKASST 186

  Fly   195 TYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIF 259
            .|||||.||:.:||:.|.||::|...|||.|:|.||:..:::|.:|:|||||||:..||.||.|:
  Rat   187 QYFWYRKTLNISPSIQENGGVQWEPALCLTLAWLIVYLCILRGTESTGKVVYFTASMPYFVLIIY 251

  Fly   260 FIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRD 324
            .:||:||.||..||.:|:|||:|:|..|..|::||||:|:|.||..|.||||.|||.|.|:|.:.
  Rat   252 LVRGLTLHGATNGLTYMFTPKIEQLANPKAWINAATQIFFSLGLGCGGLIAFASYNEPSNDCQKH 316

  Fly   325 VLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNG 389
            .::|||.|:.|||::|:|.|:|.|||||.|.:.|:  |..||:......|.|  |:..|.:|...
  Rat   317 AVIVSVINSTTAIFSSIVTFSIYGFKATFNYENCL--NKVILLLTNSFDLED--GFLTASNLEEV 377

  Fly   390 TELLRL-----------QLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLS 443
            .:.|..           .:..|||..||:.|.:||||||||:|:||..:..:..|:||:|.|||:
  Rat   378 KDYLASTYPNKYSEVFPHIRNCSLESELNTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLT 442

  Fly   444 LGLGSQIGILEGMLCTLFDIDIIKR-VKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGT 507
            ||:||.:|....:|..|.|..:|.. :.|:.::|:|||....||.:|...||.||..:|:.:|.|
  Rat   443 LGMGSMVGTGTAILTPLTDSKVISSYLPKEAISGLVCLINCAVGMVFTMEAGNYWFDIFNDYAAT 507

  Fly   508 IGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVV-FMVI 571
            :.|:::.|:|.|||.::||..||..|:..|||.....||:..|.::.|:|::.:.:..:. :::.
  Rat   508 LSLLLIVLVETIAVCYVYGLRRFESDLRAMTGRPLNWYWKTMWVFVSPLIIIGLFIFYLSDYILT 572

  Fly   572 RNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFL 615
            ....|.||:|..|.:..|.||.:.:.:...::.:..:.:|:|.|
  Rat   573 GTLQYQAWDATQGHVVIKDYPTYALAVIGLLVASSTMCIPLVAL 616

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 256/576 (44%)
RGD1566368XP_002730032.2 SLC5-6-like_sbd 43..618 CDD:294310 257/579 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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