DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Slc6a20b

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_035861.2 Gene:Slc6a20b / 22599 MGIID:1336891 Length:635 Species:Mus musculus


Alignment Length:617 Identity:265/617 - (42%)
Similarity:388/617 - (62%) Gaps:31/617 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 ARGDGTHGVTIVLTAPQRNSVQSVDIPG-NEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQ 86
            |.|.|.|        |.|........|| .|..|..|...:||.|..|.|:|||||:||||||||
Mouse    23 AGGPGQH--------PGRPRSTECAHPGVVEKVRPKWDNPLQFLLVCISYAVGLGNVWRFPYLCQ 79

  Fly    87 QNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALY 151
            ..|||:||:|:::|||:||:||..:||.:|||||.|::|.|.||.|:|.|:||:|.:|:...::|
Mouse    80 MYGGGSFLVPYIIMLIVEGMPLLYLELAVGQRMRQGSIGAWRTISPYLSGVGIASLVVSFLASVY 144

  Fly   152 YNVIITWVFFYLFNSFRYPLPWSSCPLNG--TGFELEECAKSSETTYFWYRTTLDAAPSMDEPGG 214
            :|||.||..:|||:||:.|||||.||||.  ||:: |||.|:|.|.|||||.||:.:||:.|.||
Mouse   145 FNVINTWALWYLFHSFQDPLPWSVCPLNSNHTGYD-EECEKASSTQYFWYRKTLNISPSIQENGG 208

  Fly   215 LKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTP 279
            ::|...|||.|:|.:|:..:::|.:|:|||||||:..||.||.|:.:||:||.||..||.:|:||
Mouse   209 VQWEPALCLTLAWLMVYLCILRGTESTGKVVYFTTSLPYFVLIIYLVRGLTLHGATNGLAYMFTP 273

  Fly   280 KVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIF 344
            |:|:|..|..|::||||:|:|.||..|.||||.|||.|.|:|.:..|:|||.|:.|||::|:|.|
Mouse   274 KIEQLANPKAWINAATQIFFSLGLGCGGLIAFASYNEPSNDCQKHALIVSVINSTTAIFSSIVTF 338

  Fly   345 AILGFKATVNVDRCVASNTEILVKNKLLGLND----TQGYEQAMSLLNGT------ELLRLQLSE 399
            :|.|||||.|.:.|:  |..||:......|.|    ....|:..:.|..|      |:.. .:..
Mouse   339 SIYGFKATFNYENCL--NKVILLLTNSFDLEDGFLTVSNLEEVKNYLASTYPNKYSEVFP-HIRN 400

  Fly   400 CSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDID 464
            |||..|||.|.:||||||||:|:||..:..:..|:||:|.|||:||:||.:|....:|..|.|..
Mouse   401 CSLESELDTAVQGTGLAFIVYTEAIKNMEVSQLWSVLYFFMLLTLGMGSMVGTGTAILTPLTDSK 465

  Fly   465 IIKR-VKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHE 528
            ||.. :.|:.::|:|||....:|.:|...||.||..:|:.:..|:.|:::.|:|.|||.::||.:
Mouse   466 IISSYLPKEAISGLVCLLNCAIGMVFTMEAGNYWFDLFNDYTATLSLLLIVLVETIAVCYVYGLK 530

  Fly   529 RFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVV-FMVIRNPTYGAWNADLGMIEQKSYP 592
            ||..|:..|||.....||:..|.::.|:::|.:.:..:. :::.....|.||:|..|.:..|.||
Mouse   531 RFESDLRAMTGRTLSWYWKVMWAFVSPLLIVGLFIFYLSDYILTGTLQYQAWDATQGHVVTKDYP 595

  Fly   593 NWVMGIALSMILAGVLPMPIV----FLMRSFQ 620
            .:.:.:...::.:..:.:|:|    |:.|.|:
Mouse   596 TYALAVIGLLVASSTMCIPLVALGTFVTRHFK 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 254/579 (44%)
Slc6a20bNP_035861.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..38 6/22 (27%)
SLC5-6-like_sbd 45..620 CDD:294310 254/578 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48419
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11616
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.890

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