DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Slc6a6

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_030111163.1 Gene:Slc6a6 / 21366 MGIID:98488 Length:631 Species:Mus musculus


Alignment Length:588 Identity:202/588 - (34%)
Similarity:313/588 - (53%) Gaps:81/588 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELG 114
            |..|:|..||.|:.|.||:.|..|||||:|||||||.:|||||||||:.:.|...|:|:|.:|:.
Mouse    46 GKPPQREKWSSKIDFVLSVAGGFVGLGNVWRFPYLCYKNGGGAFLIPYFIFLFGSGLPVFFLEVI 110

  Fly   115 IGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLN 179
            |||....|.:..|..|.|...|||.:|.::...:.:||.||:.|..:|||:||:..|||:.|..:
Mouse   111 IGQYTSEGGITCWEKICPLFSGIGYASIVIVSLLNVYYIVILAWATYYLFHSFQKDLPWAHCNHS 175

  Fly   180 -GTGFELEECAKSSETTY--------------FWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTI 229
             .|...:|:..:.:|:.:              ||.|..|..:..:|.||.|||.:.|||:|.|.:
Mouse   176 WNTPQCMEDTLRRNESHWVSLSTANFTSPVIEFWERNVLSLSSGIDNPGSLKWDLALCLLLVWLV 240

  Fly   230 VFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAA 294
            .||.:.||::|:|||||||:.||:.:|.:..:||:||.|||.|:.....|.:.:|.:|.||:||.
Mouse   241 CFFCIWKGVRSTGKVVYFTATFPFAMLLVLLVRGLTLPGAGEGIKFYLYPDISRLGDPQVWIDAG 305

  Fly   295 TQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCV 359
            ||:|:|:.:..|::.:.||||..|.|..||.:|:...|:.|:..:...||:||||.|        
Mouse   306 TQIFFSYAICLGAMTSLGSYNKYKYNSYRDCMLLGCLNSGTSFVSGFAIFSILGFMA-------- 362

  Fly   360 ASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAI 424
                            ..||.:.|                       |.|..|.|||||.:.:|:
Mouse   363 ----------------QEQGVDIA-----------------------DVAESGPGLAFIAYPKAV 388

  Fly   425 VELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDI---DIIKRVKKQHVTGVVCLFCFIVG 486
            ..:|...||::|||.|||.|||.||...:||.:.:|.|:   .:.|..:::....::|...:::|
Mouse   389 TMMPLPTFWSILFFIMLLLLGLDSQFVEVEGQITSLVDLYPSFLRKGYRREIFIAILCSISYLLG 453

  Fly   487 FIFCTGAGEYWLKMFDSFAGT-IGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTW 550
            ....|..|.|..::||.:|.: :.|:.||..|...:.:|||.:...:.|..|.|||||.:.:::|
Mouse   454 LTMVTEGGMYVFQLFDYYAASGVCLLWVAFFECFVIAWIYGGDNLYDGIEDMIGYRPGPWMKYSW 518

  Fly   551 RYIGPVIMV-CILVSSVVFMVIR-NPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIV 613
            ..|.|.:.| |.:.|.|.::.:. |..|             .||:|.:|:...:.|:.:|.:|:|
Mouse   519 AVITPALCVGCFVFSLVKYVPLTYNKVY-------------RYPDWAIGLGWGLALSSMLCIPLV 570

  Fly   614 FLM 616
            .::
Mouse   571 IVI 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 200/583 (34%)
Slc6a6XP_030111163.1 SLC5-6-like_sbd 51..592 CDD:382020 200/583 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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