DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and snf-10

DIOPT Version :10

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_505682.2 Gene:snf-10 / 191769 WormBaseID:WBGene00004909 Length:673 Species:Caenorhabditis elegans


Alignment Length:643 Identity:138/643 - (21%)
Similarity:235/643 - (36%) Gaps:168/643 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 ERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQR 118
            |...|:.|.:...:.:.:....||||.|||||...||. |...|....:...:||..:|..:||.
 Worm    76 EGPTWTSKWEAITATLSFVTCSGNIWFFPYLCGYYGGW-FPYQFTFCYVFIAVPLLYLETALGQY 139

  Fly   119 MRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITW------VFFYLFNSFRYPLPWSSCP 177
            .....|.|::.:.|.:.|:....|.:.:|..:..:|   |      :|.:...|.....||.||.
 Worm   140 ASASPLSVFSRMAPAMAGLSAGMCFIMVFRTISLSV---WAIYDLTIFTHASQSIWSTSPWESCQ 201

  Fly   178 LNGTGFELEECAKSSETTYFW---------YRTTLDA--------APSMDEPGGLKW-------- 217
            .:.:|........||:.|:..         |:..|.|        :|.|....||.:        
 Worm   202 ESQSGDYCVNYKLSSKCTWIQPGSDKECDEYQEMLIATRGFQQRKSPFMSFVHGLMYKRSITMND 266

  Fly   218 W------IVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGL--- 273
            |      .::|.:..|.|:..|.:.|    .||:..|.:   :.||:..:..|.|...|..|   
 Worm   267 WEPPSVTSIICAVCLWIIIGIISIGG----SKVLGRTGI---VALTLLLVGTIMLLSYGMSLNDT 324

  Fly   274 MHMYTP-------KVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVC 331
            .:::|.       ..:|.:....|.|||.....:..:..|.:..|.|.|...|...|||||:|:.
 Worm   325 TNVFTAFFYQSEGYEDKWMWVWSWADAAAHALRALNVGCGGIQKFASLNNFHNKIHRDVLLISIV 389

  Fly   332 NAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQ 396
            :     :...:...:|.|.....:.|              |...|.:..|            |:|
 Worm   390 S-----FVFYICTGLLSFMFMAEIGR--------------LYYPDLEASE------------RIQ 423

  Fly   397 L------SECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSL---GLGSQIGI 452
            |      .|..::..|.|::.|:                  .|..||:..|.:.   |:.|.|.:
 Worm   424 LYATPVMIESVISEILTNSSMGS------------------IWVFLFWLTLAACSIQGISSYIWV 470

  Fly   453 LEGMLCTLFDIDIIKRVK-----------KQHVTGVVCLFCFIVGFI----FCTGAGEYWLKMFD 502
            :..|        |::|:.           ..|...::.....:.|.|    |....|...:...:
 Worm   471 ISSM--------IVERLNGSRRKYGKALASWHKRAIILAIMSVTGLISSLPFLGNGGINLMSSIE 527

  Fly   503 SFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYR--PGRYWQWTWRYIGPVIMV----CI 561
            :|| :.|.:.:|.:|:|.|.::||.:||:.:|..|.|..  |..:|...|..|.|::::    ||
 Worm   528 TFA-SYGTIFIAFVEVITVSYVYGFKRFSVNIRAMIGGHGPPNVFWWLNWLVISPILLIVTFGCI 591

  Fly   562 LVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMRSF 619
            :.           |:|...|    ..:.|..:..:|.:|       |.||.:|::..|
 Worm   592 VA-----------TFGQKKA----FNENSIVSDPIGYSL-------LVMPCIFVILYF 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 136/638 (21%)
snf-10NP_505682.2 SNF 78..628 CDD:395155 137/641 (21%)

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