DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and snf-5

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_496735.1 Gene:snf-5 / 174923 WormBaseID:WBGene00004904 Length:728 Species:Caenorhabditis elegans


Alignment Length:746 Identity:184/746 - (24%)
Similarity:299/746 - (40%) Gaps:153/746 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 THGVTIVLTAPQRNSVQSVDIPGNEPE--RAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGG 90
            |...|:..|.|      ::|.|..|.|  |..:....:|.|:.:|.:||||||||||.....|||
 Worm    59 TKNTTVTTTRP------TLDTPPEEEEEKRDGFGNSFEFVLTSLGLAVGLGNIWRFPTRAYNNGG 117

  Fly    91 GAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVI 155
            .|||||::....|.|:|....|...||........::..:.|.|.|:|.....|...||:||.||
 Worm   118 SAFLIPYLTCAFLFGLPAVYFEFLTGQYQGKSPPVIFRRVRPILEGVGWMGVFVAALVAIYYIVI 182

  Fly   156 ITWVFFYLFNSFR--YPLPWSSC------------------------------------PL---- 178
            ::|:..|:.|..|  :.| ||.|                                    |:    
 Worm   183 VSWISIYMINICRGHFAL-WSHCNNDWNNGTSCITMADQYLCKNHTKVMANSTLWNSSLPIPDKM 246

  Fly   179 ---NGTGFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQS 240
               ||...:......|:.|..::....:..:..|.:.||..|.:...:.:.|.:....::||.:.
 Worm   247 VYFNGACQDANGTDVSTATEQYFMTYIVQPSSGMLDFGGFNWPVFAAMSVCWLLTGLGILKGAKI 311

  Fly   241 SGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGL-MHMYTPKVEKLLEPTVWLDAATQVFYSFGLA 304
            .||:.|.:.|.||:::.:.||.|:...|:|.|| |:..||...||.|...|.:|..|:.:|..:.
 Worm   312 MGKISYVSVLVPYVLVVVLFINGVFQDGSGVGLEMYFGTPNYTKLYEQDTWTEALKQLCFSLSVG 376

  Fly   305 FGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKN 369
            .|.||:..||:..:||..||.|:|.:.:...::.....:||.||:.|     :....:.:.:||:
 Worm   377 HGGLISLSSYSPKRNNIFRDALIVIIGDTTMSLVGGGAVFATLGYLA-----KATGQDVKDVVKS 436

  Fly   370 KLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWA 434
                                                      |..|||:|:.:|:..:|....|.
 Worm   437 ------------------------------------------GLSLAFVVYPEAMTRMPVPWLWC 459

  Fly   435 VLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLK 499
            .:||.||..||..::|.:::.....::|.....|.:|..|....|...:.:|.:|.|.||.||.:
 Worm   460 FIFFLMLFLLGASTEIALVDVFCSCIYDQYPRFRNRKWIVVIAWCSVLYCIGLVFSTRAGYYWFE 524

  Fly   500 MFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRY--------WQWT--WRYIG 554
            |||.:|.....|...:.|::.:::|||.....:||.::.|:...::        |.:|  |..|.
 Worm   525 MFDEYAAGFSSVCTVVCELLVMMYIYGFRNVRDDITEVVGHARNKFTGAIGAHSWYFTANWMVIS 589

  Fly   555 PVIMVCILVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNW--VMGIALSMILAGVLPMPIVFLMR 617
            |.|.:.::..|.|    |...|        |.....||..  :.|..||.:  .|:.:||..|:.
 Worm   590 PSIALILVGLSFV----REYPY--------MGRHDIYPAVFDIFGWFLSFL--PVIIVPIFMLLN 640

  Fly   618 SFQCLK--------VDLDIHQGSIRRNETTASTKEMIDND---DDDDEDDENDFSGPALGGHVKT 671
            ..:|..        ..|.....|.||.....|..::...|   |.:..|:||             
 Worm   641 FIRCRNRGHSYRTLFMLQKQHASYRRIAANYSKDQLALQDQLPDKEPWDEEN------------- 692

  Fly   672 QSDFSDDDEEDKPMTMRMMMMRPTTTTKTSN 702
             .|.:|.:.|.:......:.:....|..||:
 Worm   693 -VDLTDSESESRNAASGDVPIDDVATIDTSS 722

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 159/619 (26%)
snf-5NP_496735.1 SLC6sbd 83..601 CDD:271359 144/565 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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