DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Slc6a13

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_006237280.2 Gene:Slc6a13 / 171163 RGDID:620788 Length:608 Species:Rattus norvegicus


Alignment Length:679 Identity:219/679 - (32%)
Similarity:341/679 - (50%) Gaps:120/679 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LNTRARGDGTHGVTIVLTAPQRNSVQSVDIPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPY 83
            ::.|..|..::|.    |.|....::.|:..|. .||..|:.||:|.||:.|..:||||:|||||
  Rat     1 MDNRVSGTTSNGE----TKPVCPVMEKVEEDGT-LEREQWTNKMEFVLSVAGEIIGLGNVWRFPY 60

  Fly    84 LCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWL------GGIGISSC 142
            ||.:||||||.||:::.|...|||:|.:|..:||....|.:..|..|.|..      .|||.:|.
  Rat    61 LCYKNGGGAFFIPYLIFLFTCGIPVFFLETALGQYTNQGGITAWRKICPIFEASVPSPGIGYASQ 125

  Fly   143 IVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGTGFELEECAKSSETT------------ 195
            ::...:.:||.|::.|..||||:||...|||.||   ...:..|.|.:..:|.            
  Rat   126 MIVSLLNVYYIVVLAWALFYLFSSFTTDLPWGSC---SHEWNTENCVEFQKTNNSLNVTSENATS 187

  Fly   196 ---YFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLT 257
               .||.|..|..:..:...|.|:|.:||||:|:|.|.:|.:.||::|:|||||||:.|||::|.
  Rat   188 PVIEFWERRVLKISDGIQHLGSLRWELVLCLLLAWIICYFCIWKGVKSTGKVVYFTATFPYLMLV 252

  Fly   258 IFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCV 322
            :..|||:||.||..|:.....|.:.:|.:|.||:||.||:|:||.:..|.|.|.||||...|||.
  Rat   253 VLLIRGVTLPGAAQGIQFYLYPNITRLWDPQVWMDAGTQIFFSFAICLGCLTALGSYNKYHNNCY 317

  Fly   323 RDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLL 387
            ||.:.:.:.|:.|:..|...||:||||                        ::..||        
  Rat   318 RDCVALCILNSSTSFVAGFAIFSILGF------------------------MSQEQG-------- 350

  Fly   388 NGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGI 452
                   :.:||.        |..|.|||||.:.:|:|.||.:|.||..||.|::.|||.||...
  Rat   351 -------VPISEV--------AESGPGLAFIAYPRAVVMLPFSPLWACCFFFMVVLLGLDSQFVC 400

  Fly   453 LEGMLCTLFDIDIIKRV-----KKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGT-IGLV 511
            :|.::..|  :|:..||     :::.:..:|.:..|.:|.|..|..|.|..::||.:|.: :.|:
  Rat   401 VESLVTAL--VDMYPRVFRKKNRREILILIVSVVSFFIGLIMLTEGGMYVFQLFDYYAASGMCLL 463

  Fly   512 VVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVIR-NP- 574
            .||:.|.:.|.::||..||.::|..|.||:|....::.|.:..|.  ||:  ::.:|.:|: .| 
  Rat   464 FVAIFESLCVAWVYGASRFYDNIEDMIGYKPWPLIKYCWLFFTPA--VCL--ATFLFSLIKYTPL 524

  Fly   575 TYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMRSFQCLKV----DLDIHQGSIRR 635
            ||.         ::.:||.|  |.||..:||          :.|..|:..    .|...:|.:|.
  Rat   525 TYN---------KKYTYPWW--GDALGWLLA----------LSSMVCIPAWSIYKLRTLKGPLRE 568

  Fly   636 NETTASTKEMIDNDDDDDEDDENDFSGPA 664
            .     .::::...:|..:..:.:.:.||
  Rat   569 R-----LRQLVCPAEDLPQKSQPELTSPA 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 203/590 (34%)
Slc6a13XP_006237280.2 SLC5-6-like_sbd 32..581 CDD:382020 209/630 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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