DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Slc6a5

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_976079.1 Gene:Slc6a5 / 171148 RGDID:621824 Length:799 Species:Rattus norvegicus


Alignment Length:643 Identity:236/643 - (36%)
Similarity:346/643 - (53%) Gaps:116/643 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GTHGVTIVLTAPQRNSVQSVDIPGNE-----PERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQ 86
            ||.|:..||.    .||.:..||.:|     ..|..||.|:.|.||::||:|||||:||||||..
  Rat   164 GTDGIASVLP----GSVATTTIPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAF 224

  Fly    87 QNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALY 151
            ||||||||||:::||.|.|:|:|.:|:.:||....|.:.||..| |.|.|.||:..|:::.:|:|
  Rat   225 QNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAI-PALQGCGIAMLIISVLIAIY 288

  Fly   152 YNVIITWVFFYLFNSFRYPLPWSSC--PLN------GTGFELEECA------------------- 189
            |||||.:..||||.||...|||.||  |.|      .|...|:.|.                   
  Rat   289 YNVIICYTLFYLFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAY 353

  Fly   190 ----------------KSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGI 238
                            .|....||.| ..|..:..::.||.::|.:..||.|:|.||:..:.|||
  Rat   354 PNLTMVNFTSQANKTFVSGSEEYFKY-FVLKISAGIEYPGEIRWPLPFCLFLAWVIVYASLAKGI 417

  Fly   239 QSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGL 303
            ::||||||||:.|||:||.|..|||:||.|||||:.:..|||.|||.:.|||.|||||:|:|...
  Rat   418 KTSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSA 482

  Fly   304 AFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVK 368
            |:|.||...|||...|||.||.|:|:..|:.|:|:|..|||:::||         :|:..::.::
  Rat   483 AWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGF---------MANERKVNIE 538

  Fly   369 NKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFW 433
            |.                                      |.:|.|:||:|:.:|:..||.:|||
  Rat   539 NV--------------------------------------ADQGPGIAFVVYPEALTRLPLSPFW 565

  Fly   434 AVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIK--RVKKQHVTGVVCLFCFIVGFIFCTGAGEY 496
            |::||.|||:|||.:....:|.::.::.| :..|  |..|...|...|:..||:||...|..|.|
  Rat   566 AIIFFLMLLTLGLDTMFATIETIVTSISD-EFPKYLRTHKPVFTLGCCICFFIMGFPMITQGGIY 629

  Fly   497 WLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCI 561
            ..::.|::|.:..||::|:.|::.:.::||.:||.|||..|.|::|..:|:..|.::.|.|:..|
  Rat   630 MFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFQPNIFWKVCWAFVTPTILTFI 694

  Fly   562 LVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMRSF 619
            |..|  |......|||::.          ||||.|.:...|:...|:.:||:|:::.:
  Rat   695 LCFS--FYQWEPMTYGSYR----------YPNWSMVLGWLMLACSVIWIPIMFVIKMY 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 226/606 (37%)
Slc6a5NP_976079.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..64
SLC6sbd_GlyT2 193..789 CDD:271389 226/610 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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