DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43066 and Slc6a3

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:NP_034150.1 Gene:Slc6a3 / 13162 MGIID:94862 Length:619 Species:Mus musculus


Alignment Length:656 Identity:217/656 - (33%)
Similarity:332/656 - (50%) Gaps:105/656 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GTHGVTIVLTAPQRNSVQSVD--------IPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPY 83
            |...|.::|...| |.||..:        .|....||..||.|:.|.||:||::|.|.|:|||||
Mouse    25 GPREVELILVKEQ-NGVQLTNSTLINPPQTPVEVQERETWSKKIDFLLSVIGFAVDLANVWRFPY 88

  Fly    84 LCQQNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFV 148
            ||.:|||||||:|:::.:::.|:|||.:||.:||..|.||.|||. |.|.|.|:|.:..:::.:|
Mouse    89 LCYKNGGGAFLVPYLLFMVIAGMPLFYMELALGQFNREGAAGVWK-ICPVLKGVGFTVILISFYV 152

  Fly   149 ALYYNVIITWVFFYLFNSFRYPLPWSSCPLNGT----------------GFELEECAKSSETTYF 197
            ..:|||||.|...|.|:||...|||..|  |.|                |..|.:...::....:
Mouse   153 GFFYNVIIAWALHYFFSSFTMDLPWIHC--NNTWNSPNCSDAHSSNSSDGLGLNDTFGTTPAAEY 215

  Fly   198 WYRTTLDAAPS--MDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFF 260
            :.|..|....|  :|:.|..:|.:..||:|...:::|.:.||:::|||||:.|:..||:|||...
Mouse   216 FERGVLHLHQSRGIDDLGPPRWQLTACLVLVIVLLYFSLWKGVKTSGKVVWITATMPYVVLTALL 280

  Fly   261 IRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDV 325
            :||:||.||..|:....:....:|.|.:||:||||||.:|.|:.||.||||.|||...|||.||.
Mouse   281 LRGVTLPGAMDGIRAYLSVDFYRLCEASVWIDAATQVCFSLGVGFGVLIAFSSYNKFTNNCYRDA 345

  Fly   326 LLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGT 390
            ::.:..|::|:..:..|:|:.||:.|..:       |..|                         
Mouse   346 IITTSINSLTSFSSGFVVFSFLGYMAQKH-------NVPI------------------------- 378

  Fly   391 ELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEG 455
                           .|.|.:|.||.||::.:||..||.:..||.:||.|||:||:.|.:|.:|.
Mouse   379 ---------------RDVATDGPGLIFIIYPEAIATLPLSSAWAAVFFLMLLTLGIDSAMGGMES 428

  Fly   456 MLCTLFD-IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMI 519
            ::..|.| ..::.|.::....|:| |..|::.....|..|.|...:.|.||....::...|:|.|
Mouse   429 VITGLVDEFQLLHRHRELFTLGIV-LATFLLSLFCVTNGGIYVFTLLDHFAAGTSILFGVLIEAI 492

  Fly   520 AVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVFMVIRNPTYGAWNADLG 584
            .|.:.||.::|::||.||||.||..||:..|:.:.|..::.::|.|:|  ..|.|.|||:     
Mouse   493 GVAWFYGVQQFSDDIKQMTGQRPNLYWRLCWKLVSPCFLLYVVVVSIV--TFRPPHYGAY----- 550

  Fly   585 MIEQKSYPNWVMGIALSMILA-GVLPMPIVFLMRSFQCLKVDLDIHQGSIRRNETTAST----KE 644
                 .:|:|..  ||..|:| ..:.|..::....|..|       .||.|.....|.|    ::
Mouse   551 -----IFPDWAN--ALGWIIATSSMAMVPIYATYKFCSL-------PGSFREKLAYAITPEKDRQ 601

  Fly   645 MIDNDD 650
            ::|..:
Mouse   602 LVDRGE 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 200/581 (34%)
Slc6a3NP_034150.1 SLC5-6-like_sbd 60..613 CDD:294310 208/620 (34%)
Interaction with TGFB1I1. /evidence=ECO:0000250 560..589 8/35 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0733
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.