DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and Slc6a5

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_006540608.1 Gene:Slc6a5 / 104245 MGIID:105090 Length:831 Species:Mus musculus


Alignment Length:643 Identity:237/643 - (36%)
Similarity:346/643 - (53%) Gaps:116/643 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 GTHGVTIVLTAPQRNSVQSVDIPGNE-----PERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQ 86
            ||.|:..||.    .||.:..||.:|     ..|..||.|:.|.||::||:|||||:||||||..
Mouse   196 GTDGIASVLP----GSVATTTIPEDEQGDENKARGNWSSKLDFILSMVGYAVGLGNVWRFPYLAF 256

  Fly    87 QNGGGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALY 151
            ||||||||||:::||.|.|:|:|.:|:.:||....|.:.||..| |.|.|.||:..|:::.:|:|
Mouse   257 QNGGGAFLIPYLMMLALAGLPIFFLEVSLGQFASQGPVSVWKAI-PALQGCGIAMLIISVLIAIY 320

  Fly   152 YNVIITWVFFYLFNSFRYPLPWSSC--PLN------GTGFELEECA------------------- 189
            |||||.:..||||.||...|||.||  |.|      .|...|:.|.                   
Mouse   321 YNVIICYTLFYLFASFVSVLPWGSCNNPWNTPECKDKTKLLLDSCVIGDHPKIQIKNSTFCMTAY 385

  Fly   190 ----------------KSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGI 238
                            .|....||.| ..|..:..::.||.::|.:..||.|:|.||:..:.|||
Mouse   386 PNLTMVNFTSQTNKTFVSGSEEYFKY-FVLKISAGIEYPGEIRWPLAFCLFLAWVIVYASLAKGI 449

  Fly   239 QSSGKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGL 303
            :|||||||||:.|||:||.|..|||:||.|||||:.:..|||.|||.:.|||.|||||:|:|...
Mouse   450 KSSGKVVYFTATFPYVVLVILLIRGVTLPGAGAGIWYFITPKWEKLTDATVWKDAATQIFFSLSA 514

  Fly   304 AFGSLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTEILVK 368
            |:|.||...|||...|||.||.|:|:..|:.|:|:|..|||:::||         :|:..::.::
Mouse   515 AWGGLITLSSYNKFHNNCYRDTLIVTCTNSATSIFAGFVIFSVIGF---------MANERKVNIE 570

  Fly   369 NKLLGLNDTQGYEQAMSLLNGTELLRLQLSECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFW 433
            |.                                      |.:|.|:||:|:.:|:..||.:|||
Mouse   571 NV--------------------------------------ADQGPGIAFVVYPEALTRLPLSPFW 597

  Fly   434 AVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIK--RVKKQHVTGVVCLFCFIVGFIFCTGAGEY 496
            |::||.|||:|||.:....:|.::.::.| :..|  |..|...|...|:..||:||...|..|.|
Mouse   598 AIIFFLMLLTLGLDTMFATIETIVTSISD-EFPKYLRTHKPVFTLGCCICFFIMGFPMITQGGIY 661

  Fly   497 WLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCI 561
            ..::.|::|.:..||::|:.|::.:.::||.:||.|||..|.|::|..:|:..|.::.|.|:..|
Mouse   662 MFQLVDTYAASYALVIIAIFELVGISYVYGLQRFCEDIEMMIGFKPNIFWKVCWAFVTPTILTFI 726

  Fly   562 LVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMRSF 619
            |..|  |......|||::.          ||||.|.:...|:...|:.:||:|:::.:
Mouse   727 LCFS--FYQWEPMTYGSYR----------YPNWSMVLGWLMLACSVIWIPIMFVIKMY 772

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 227/606 (37%)
Slc6a5XP_006540608.1 SLC6sbd_GlyT2 225..821 CDD:271389 227/610 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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