DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43066 and slc6a16

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_004916326.1 Gene:slc6a16 / 100497867 XenbaseID:XB-GENE-996340 Length:677 Species:Xenopus tropicalis


Alignment Length:669 Identity:288/669 - (43%)
Similarity:406/669 - (60%) Gaps:50/669 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 IPGNEPERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNGGGAFLIPFMVMLILEGIPLFLIE 112
            :|.....|..|..|:|:.|:.:|:||||||:|||||||.|||||:||:.:.::|::.|||||.:|
 Frog    21 LPAESVARPTWGSKVQYILAQVGFSVGLGNVWRFPYLCHQNGGGSFLLLYFLLLLIIGIPLFFLE 85

  Fly   113 LGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNVIITWVFFYLFNSFRYPLPWSSCP 177
            |..||.:|.|::|||..|.|.|.|||.:||:|..||||||||||.|..|||||||.|||||.:||
 Frog    86 LAAGQSIRQGSIGVWKHISPRLAGIGFASCVVCGFVALYYNVIIGWSLFYLFNSFHYPLPWENCP 150

  Fly   178 -LNGTGFELEECAKSSETTYFWYRTTLDAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSS 241
             |.....|:.||||||.|||||||:.|:...:: |...:.|.:..||.|:|.:|...::|||:||
 Frog   151 TLPNMTQEVTECAKSSNTTYFWYRSALNVTNTI-ESSEMNWPMTGCLCLAWFLVCGGMIKGIKSS 214

  Fly   242 GKVVYFTSLFPYIVLTIFFIRGITLRGAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFG 306
            |||:||:|:|||:||..|.|||:.|.||..|:..|:|||:|......||..||||||::.||.||
 Frog   215 GKVMYFSSVFPYVVLFCFLIRGLLLEGAADGIRIMFTPKLEIWGNIQVWRQAATQVFFALGLGFG 279

  Fly   307 SLIAFGSYNTPKNNCVRDVLLVSVCNAVTAIYASVVIFAILGFKATVNVDRCVASNTE---ILVK 368
            |:||:.|||..:|||..|.:|||..|.:|:|.|::|:||:|||:|......|:.:|.|   .|:.
 Frog   280 SVIAYSSYNDRQNNCHFDAILVSFINFMTSILATLVVFAVLGFRANDLTRHCIDTNREKILYLIS 344

  Fly   369 NKLL--------GLNDTQGYEQAMSLLNGTELLRLQ---LSECSLAHELDNAAEGTGLAFIVFTQ 422
            |..|        .|.::: |.|...:.|.|  |.||   :|:|.:...::...||||||||.||:
 Frog   345 NGSLYENIVPMKNLTNSE-YSQWYEITNNT--LNLQQYGISDCRVEDVMNEGVEGTGLAFIAFTE 406

  Fly   423 AIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFDIDIIKRVKKQHVTGVVCLFCFIVGF 487
            |:...|.:|||::|||.|||:|||.:..|.::|::..|.|.....|.||...|.:.|:...::|.
 Frog   407 AMTRFPASPFWSILFFLMLLNLGLSTMFGNMQGIITPLLDNFPYLRKKKTIFTVICCITGLLIGL 471

  Fly   488 IFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIYGHERFTEDIFQMTGYRPGRYWQWTWRY 552
            ||...:|.|::.|||.::.|:.|::|.:.|.|||.::||.|||.:||..|.|:||.|.:::.|:|
 Frog   472 IFVQRSGSYFVSMFDDYSATLPLIIVVIFENIAVAWVYGAERFMDDIGGMLGHRPWRIYKYIWQY 536

  Fly   553 IGPVIMVCILVSSVVFMVIRNPTYGAWNADLGMIEQKSYPNWVMGIALSMILAGVLPMPIVFLMR 617
            |..:.|:.:|::|::.|.|..|.|.|||.:....|...||.|.:|:..|:|:...||:|||||..
 Frog   537 ISILGMIGLLLASLIRMCIEYPRYQAWNQEQAKKEMLEYPPWALGMLTSLIIVAALPIPIVFLKH 601

  Fly   618 SFQ--CLK------VDLDIHQGSIRRNETTASTKEMIDNDDDDDED-----------DENDFSGP 663
            ..|  .||      .|.|..||:        :..:||....:...|           :..||   
 Frog   602 IIQDWILKWKTKTYGDCDYTQGN--------TVDDMIGPIVESPADLGYVGNGYLPVEMEDF--- 655

  Fly   664 ALGGHVKTQSDFSDDDEED 682
            |..|.:.|:.|. ||.|||
 Frog   656 AERGKLTTEEDL-DDAEED 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 266/576 (46%)
slc6a16XP_004916326.1 SLC5-6-like_sbd 28..599 CDD:382020 264/574 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 582 1.000 Domainoid score I212
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 589 1.000 Inparanoid score I978
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D251682at33208
OrthoFinder 1 1.000 - - FOG0001784
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1148
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

Return to query results.
Submit another query.