DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43066 and slc6a4l

DIOPT Version :9

Sequence 1:NP_001246408.1 Gene:CG43066 / 37129 FlyBaseID:FBgn0262476 Length:721 Species:Drosophila melanogaster
Sequence 2:XP_012825214.2 Gene:slc6a4l / 100496361 XenbaseID:XB-GENE-981144 Length:590 Species:Xenopus tropicalis


Alignment Length:593 Identity:210/593 - (35%)
Similarity:308/593 - (51%) Gaps:85/593 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TAP-QRNSVQSVDIPGNE----------PERAAWSGKMQFFLSIIGYSVGLGNIWRFPYLCQQNG 89
            |.| .::..|....|.|.          ..|..||.||.|.||:||::|.|||:|||||:|.|||
 Frog     7 TVPVDKHPKQQASTPNNNAMPLPLITQADSRDKWSKKMDFLLSVIGFAVDLGNVWRFPYICYQNG 71

  Fly    90 GGAFLIPFMVMLILEGIPLFLIELGIGQRMRLGALGVWNTIHPWLGGIGISSCIVTLFVALYYNV 154
            |||||||:.:|.|..|:|||.:||.:||..|:||:.:|..|.|...|||.:.||:.|:|:.|||.
 Frog    72 GGAFLIPYTIMAIFGGVPLFYMELALGQFHRMGAIPIWKRICPIFKGIGFAICIIALYVSFYYNT 136

  Fly   155 IITWVFFYLFNSFRYPLPWSSC--PLNGTGFELEECA-------------KSSETTYFWYRTTL- 203
            ||.|..||.::||...|||::|  |.|     ...|.             ..|....|:.|..| 
 Frog   137 IIAWALFYFYSSFTETLPWTNCDNPWN-----TPNCTNYFGRSNITWNNYSKSPAEEFYTRKVLG 196

  Fly   204 -DAAPSMDEPGGLKWWIVLCLMLSWTIVFFIVMKGIQSSGKVVYFTSLFPYIVLTIFFIRGITLR 267
             ..|..:|..|||:|.::|||.:.:|||:|.:.||:::|||||:.|:..||:||.|..|||.||.
 Frog   197 IHEAEGLDNVGGLRWQLILCLFIIFTIVYFSLWKGVKTSGKVVWVTATLPYVVLLILLIRGATLP 261

  Fly   268 GAGAGLMHMYTPKVEKLLEPTVWLDAATQVFYSFGLAFGSLIAFGSYNTPKNNCVRDVLLVSVCN 332
            ||..|::....||.|||::..||:|||.|:|:|.|..||.|:|..|||...|||.||.|:.|..|
 Frog   262 GAWRGILFYLRPKWEKLMDTAVWVDAAAQIFFSLGPGFGVLLALSSYNPFHNNCYRDALITSTVN 326

  Fly   333 AVTAIYASVVIFAILGFKATVNVDRCVASNTEILVKNKLLGLNDTQGYEQAMSLLNGTELLRLQL 397
            .:|:..:..|||.:||:.|.:.     ....|.:.|:|                           
 Frog   327 CLTSFVSGFVIFTVLGYMAEMR-----GVEVEDVAKDK--------------------------- 359

  Fly   398 SECSLAHELDNAAEGTGLAFIVFTQAIVELPGAPFWAVLFFTMLLSLGLGSQIGILEGMLCTLFD 462
                          |..|.||.:.:||..:.|:.|:|::||.|:::|||.|..|.||.::..:.|
 Frog   360 --------------GPSLLFITYPEAIANMVGSTFFAIIFFLMMITLGLDSTFGGLEAIITAVMD 410

  Fly   463 --IDIIKRVKKQHVTGVVCLFCFIVGFIFCTGAGEYWLKMFDSFAGTIGLVVVALMEMIAVIFIY 525
              ..|:.:.::..|.|:| :.||.......|..|.|.:|:.:.|.....::.|..:|.|||.:.|
 Frog   411 EYPHILSKRRELFVLGLV-IVCFTGSLSTLTYGGAYVVKLLEQFGAGCPIIAVVFLEAIAVSWFY 474

  Fly   526 GHERFTEDIFQMTGYRPGRYWQWTWRYIGPVIMVCILVSSVVF---MVIRNPTYGAWNADLGMIE 587
            |.:||:.|:..|.|:.||.:|:..|..|.|..:..|:|||::.   :::.:..|..|...:|.:.
 Frog   475 GIQRFSNDVKSMLGFVPGIFWRICWVAISPAFLAFIIVSSLMDQPPLILFDYQYPKWTVSVGFLI 539

  Fly   588 QKSYPNWV 595
            ..|...|:
 Frog   540 GASSFIWI 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43066NP_001246408.1 SLC6sbd-B0AT-like 55..617 CDD:271364 205/563 (36%)
slc6a4lXP_012825214.2 SLC5-6-like_sbd 37..573 CDD:382020 205/563 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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